RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZNF724A8MTY0 619 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 BTNL10A8MVZ5 291 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 FABP7O15540 132 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 CRXO43186 299 aaPredicted RBP3.36□□□□□ -1.87
VPS41-212ENST00000482217 MBTPS2O43462 519 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 ZNF207O43670 478 aaKnown RBP3.36□□□□□ -1.87
VPS41-212ENST00000482217 BUB3O43684 328 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 PDE6DO43924 150 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 FKBP6O75344 327 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 IGF2P01344 180 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 IGKV1D-16P01601 117 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 C1QCP02747 245 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 LGALS2P05162 132 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 OR56A5P0C7T3 313 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 IFI30P13284 250 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 PLA2G2AP14555 144 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 GABRR1P24046 479 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 RCVRNP35243 200 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 HRH1P35367 487 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 OPRL1P41146 370 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 LGALS7P47929 136 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SUB1P53999 127 aaKnown RBP eCLIP3.36□□□□□ -1.87
VPS41-212ENST00000482217 DVL1P1P54792 670 aaPredicted RBP3.36□□□□□ -1.87
VPS41-212ENST00000482217 DLX1P56177 255 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 CKS1BP61024 79 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 ARL16Q0P5N6 197 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SMAGPQ0VAQ4 97 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 TCP10Q12799 353 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 EDDM3AQ14507 147 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 PRSS8Q16651 343 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 TRMT12Q53H54 448 aaKnown RBP3.36□□□□□ -1.87
VPS41-212ENST00000482217 PYCR3Q53H96 274 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 C9orf64Q5T6V5 341 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 FAM78BQ5VT40 261 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SAMD13Q5VXD3 122 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 ZNF324BQ6AW86 544 aaPredicted RBP3.36□□□□□ -1.87
VPS41-212ENST00000482217 OR10K2Q6IF99 312 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 RASSF6Q6ZTQ3 369 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SLC16A13Q7RTY0 426 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 PEX26Q7Z412 305 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 HOGA1Q86XE5 327 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 GAPTQ8N292 157 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 KBTBD8Q8NFY9 601 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 OR13G1Q8NGZ3 307 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 OR4X1Q8NH49 305 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SLC37A2Q8TED4 501 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 FGF11Q92914 225 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 TCEAL3Q969E4 200 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SLC25A38Q96DW6 304 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SEH1LQ96EE3 360 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 PDXPQ96GD0 296 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 C14orf144Q96I85 54 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 RARRES2Q99969 163 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 GINS3Q9BRX5 216 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 C1QTNF4Q9BXJ3 329 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 KRTAP1-5Q9BYS1 174 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 DCSTAMPQ9H295 470 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 TXNIPQ9H3M7 391 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 PANK3Q9H999 370 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 TPT1P8Q9HAU6 139 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 UBE2TQ9NPD8 197 aaPredicted RBP3.36□□□□□ -1.87
VPS41-212ENST00000482217 ESM1Q9NQ30 184 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 RASL12Q9NYN1 266 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 TAS2R16Q9NYV7 291 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 OPTCQ9UBM4 332 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 OR12D3Q9UGF7 316 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 JPT1Q9UK76 154 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 MMP17Q9ULZ9 603 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 HSPB11Q9Y547 144 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 UBIAD1Q9Y5Z9 338 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 SETD5Q9C0A6 1442 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 A0A1W2PS18 150 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 DAPL1A0PJW8 107 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 OR4C46A6NHA9 309 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 MANBAO00462 879 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 MFSD11O43934 449 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 SULT1C4O75897 302 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 ZNF25P17030 456 aaPredicted RBP3.35□□□□□ -1.87
VPS41-212ENST00000482217 C4BPBP20851 252 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 USF1P22415 310 aaPredicted RBP3.35□□□□□ -1.87
VPS41-212ENST00000482217 MARK3P27448 753 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 CA5AP35218 305 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 CD200P41217 278 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 SERPINB10P48595 397 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 FABP6P51161 128 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 CDK5Q00535 292 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 SLC10A7Q0GE19 358 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 ECH1Q13011 328 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 GAGE5Q13069 117 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 GAGE6Q13070 117 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 ZNF154Q13106 437 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 IZUMO4Q1ZYL8 232 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 FAM106AQ4KMX7 169 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 TMEM128Q5BJH2 165 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 MS4A13Q5J8X5 152 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 DCST2Q5T1A1 773 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 UNQ9370/PRO34162Q6UXP9 181 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 CATSPER3Q86XQ3 398 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 UBALD2Q8IYN6 164 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 DAW1Q8N136 415 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms