RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	ZNF879	B4DU55	563 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	TRIM77	I1YAP6	450 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116		J3QRE1	110 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	SYNGR1	O43759	233 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	SULT1C4	O75897	302 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	TOX4	O94842	621 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	PLAT	P00750	562 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	PPIAL4G	P0DN37	164 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	MMP9	P14780	707 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	GABRB1	P18505	474 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	GABRA2	P47869	451 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	TGM4	P49221	684 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	OR12D2	P58182	307 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	ISL1	P61371	349 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	PRB3	Q04118	309 aa	Predicted RBP	10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	TUSC1	Q2TAM9	212 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	SLC25A30	Q5SVS4	291 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	ZBTB37	Q5TC79	503 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	TMEM42	Q69YG0	159 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116		Q6ZSR3	168 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	DOK3	Q7L591	496 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	SLC36A1	Q7Z2H8	476 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	ANGPTL6	Q8NI99	470 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	NPRL2	Q8WTW4	380 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	C1orf147	Q96MC9	270 aa	Predicted RBP	10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	AMBN	Q9NP70	447 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	NLK	Q9UBE8	527 aa		10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.64	□□□□□ -0.71
ABCF3-215	ENST00000481116	IGKV1D-17	A0A075B6S4	117 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	LOC100130705	A0A1B0GUX0	176 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116		A0A1B0GVI7	797 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	DAPL1	A0PJW8	107 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	PQLC2L	A1A4F0	135 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	OR5B21	A6NL26	309 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	OR2AT4	A6NND4	320 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	DLGAP1	O14490	977 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	SYT7	O43581	403 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	NDUFB3	O43676	98 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	PSG2	P11465	335 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	CCL1	P22362	96 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	HAAO	P46952	286 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	DLX1	P56177	255 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	UBA52	P62987	128 aa	Known RBP	10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	ACTG1	P63261	375 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	BAMBI	Q13145	260 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	DGUOK	Q16854	277 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	MEDAG	Q5VYS4	303 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	ZNF788	Q6ZQV5	615 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	FAM220A	Q7Z4H9	259 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	ANGPTL5	Q86XS5	388 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	PDZD9	Q8IXQ8	264 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	PNLDC1	Q8NA58	520 aa	Known RBP	10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	ZNF671	Q8TAW3	534 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	FAM216A	Q8WUB2	273 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	H1FX	Q92522	213 aa	Known RBP	10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	TMIGD2	Q96BF3	282 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	C12orf43	Q96C57	262 aa	Known RBP	10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	LGALS12	Q96DT0	336 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	WDFY2	Q96P53	400 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	JMJD8	Q96S16	334 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	SIRPD	Q9H106	197 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	ELL3	Q9HB65	397 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	FAM118A	Q9NWS6	357 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	EXOG	Q9Y2C4	368 aa	Known RBP	10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	ANK2	Q01484	3957 aa		10.63	□□□□□ -0.71
ABCF3-215	ENST00000481116	DSCAML1	Q8TD84	2053 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	CENPVL3	A0A0U1RRI6	287 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	LOC107986453	A0A1B0GWG9	222 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	FAM230A	A0A1W2PPH8	454 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	DNAJC9-AS1	A6NH13	148 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	NKX6-3	A6NJ46	265 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	ANKRD65	E5RJM6	399 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116		J3QLW9	94 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	INMT	O95050	263 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	ECD	O95905	644 aa	Predicted RBP	10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	LIPF	P07098	398 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	DBT	P11182	482 aa	Known RBP	10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	ZNF19	P17023	458 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	CEBPD	P49716	269 aa	Predicted RBP	10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	NANOS3	P60323	173 aa	Known RBP	10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	ZNF91	Q05481	1191 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	UBE2V2	Q15819	145 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	LRRC36	Q1X8D7	754 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	DEFB112	Q30KQ8	113 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	CDON	Q4KMG0	1287 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	LRRC10	Q5BKY1	277 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	METTL11B	Q5VVY1	283 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	RBMS3	Q6XE24	437 aa	Known RBP	10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	ACP7	Q6ZNF0	438 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	LHFPL3	Q86UP9	236 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	CALHM1	Q8IU99	346 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	ZNRF1	Q8ND25	227 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	OR2G2	Q8NGZ5	317 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	RHOXF1	Q8NHV9	184 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	ZFAND2B	Q8WV99	257 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	TAF15	Q92804	592 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	STMN2	Q93045	179 aa		10.62	□□□□□ -0.71
ABCF3-215	ENST00000481116	LHX4	Q969G2	390 aa		10.62	□□□□□ -0.71

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