RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PGM2L1Q6PCE3 622 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 LINC00322Q6ZN03 302 aaPredicted RBP9.11□□□□□ -0.95
USP11-208ENST00000480104 KCTD8Q6ZWB6 473 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 TCF23Q7RTU1 214 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 FAM122BQ7Z309 247 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 ZNF561Q8N587 486 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 MYOZ3Q8TDC0 251 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 IFT81Q8WYA0 676 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 SPTSSAQ969W0 71 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 TMEM133Q9H2Q1 129 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 SLC25A37Q9NYZ2 338 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 SIGLEC8Q9NYZ4 499 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 ZIM2Q9NZV7 527 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 PYCARDQ9ULZ3 195 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 N6AMT1Q9Y5N5 214 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 ANXA2P2A6NMY6 339 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 FGF16O43320 207 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 ITM2AO43736 263 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 IGHG4P01861 327 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 CD14P08571 375 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 IFI30P13284 250 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 PSMB8P28062 276 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 KIR3DL2P43630 455 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 GPR12P47775 334 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 ISL1P61371 349 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 FAM3AP98173 230 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 CFHR3Q02985 330 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 MSANTD1Q6ZTZ1 278 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 SLC16A9Q7RTY1 509 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 MSRB3Q8IXL7 192 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 ZDHHC23Q8IYP9 409 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 Q8N1X5 172 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 OR13C2Q8NGS9 318 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 GTF2H4Q92759 462 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 SPSB4Q96A44 273 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 BPIFA2Q96DR5 249 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 ZNF714Q96N38 554 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 TSSK2Q96PF2 358 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 OR4C12Q96R67 309 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 GON7Q9BXV9 100 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 TMEM38AQ9H6F2 299 aa9.1□□□□□ -0.95
USP11-208ENST00000480104 HMCN2Q8NDA2 5059 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 DCTN6O00399 190 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 IGLV1-51P01701 117 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 TK1P04183 234 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 IGF1P05019 195 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 PRDX2P32119 198 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 OTX1P32242 354 aaPredicted RBP9.09□□□□□ -0.95
USP11-208ENST00000480104 SLC7A2P52569 658 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 TAS2R41P59536 307 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 BDH1Q02338 343 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 TPTE2P1Q5T6R2 138 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 DRAM2Q6UX65 266 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 ZBTB49Q6ZSB9 765 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 OR2AJ1Q8NGZ0 328 aa9.09□□□□□ -0.95
USP11-208ENST00000480104 OR6C68A6NDL8 312 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 LEUTXA8MZ59 168 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 XRCC2O43543 280 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 TYROBPO43914 113 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 MMP23AO75900 390 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 CDK2AP2O75956 126 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 PITPNAQ00169 270 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 KIAA0141Q14154 515 aaPredicted RBP9.08□□□□□ -0.96
USP11-208ENST00000480104 FAM76BQ5HYJ3 339 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 BAIAP2L2Q6UXY1 529 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 PTCHD4Q6ZW05 846 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 PATL1Q86TB9 770 aaKnown RBP9.08□□□□□ -0.96
USP11-208ENST00000480104 OAFQ86UD1 273 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 OR56B4Q8NH76 319 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 HPSE2Q8WWQ2 592 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 OR5P3Q8WZ94 311 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 UBE2E2Q96LR5 201 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 OR8B4Q96RC9 309 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 PARD6BQ9BYG5 372 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 ALX4Q9H161 411 aaPredicted RBP9.08□□□□□ -0.96
USP11-208ENST00000480104 IKZF5Q9H5V7 419 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 NMNAT1Q9HAN9 279 aaPredicted RBP9.08□□□□□ -0.96
USP11-208ENST00000480104 DNAJB9Q9UBS3 223 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 CYB5R1Q9UHQ9 305 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 GLS2Q9UI32 602 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 RIMS3Q9UJD0 308 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 VSIG4Q9Y279 399 aa9.08□□□□□ -0.96
USP11-208ENST00000480104 hCG_38984A0A1B0GV85 526 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A18PA6NE21 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A16PA6NEW6 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A20PA6NIJ5 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A9PA6NNJ1 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A12PA8MX19 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A5PA8MXJ8 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 M0QX08 132 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 PSMD9O00233 223 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 XRCC3O43542 346 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A15PP0C7V4 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A13PP0C7W8 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A14PP0C7W9 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 FAM90A24PP0C7X0 464 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 TMEM11P17152 192 aa9.07□□□□□ -0.96
USP11-208ENST00000480104 MNDAP41218 407 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms