RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 JMJD1CQ15652 2540 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 TRAV38-1A0A0B4J264 116 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM269A0A1B0GVZ9 245 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 LRP5LA4QPB2 252 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 GGT3PA6NGU5 568 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TVP23AA6NH52 213 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 METTL15A6NJ78 407 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ANXA2P2A6NMY6 339 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SRRM5B3KS81 715 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF670-ZNF695F2Z2N8 137 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 CLDN34H7C241 214 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 LGALS8O00214 317 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 EI24O14681 340 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PPIHO43447 177 aaKnown RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SPRY3O43610 288 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SELENOFO60613 162 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 INMTO95050 263 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 FADS2O95864 444 aaKnown RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 GPANK1O95872 356 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PNPP00491 289 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 MT-ND2P03891 347 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 KRT8P05787 483 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 CD1AP06126 327 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 UBCP0CG48 685 aaKnown RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PSKH1P11801 424 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PIPP12273 146 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 IRF2P14316 349 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 DCKP27707 260 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 NAA10P41227 235 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TGM4P49221 684 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 RPS7P62081 194 aaKnown RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 GNG3P63215 75 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PAX8Q06710 450 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 RIPPLY1Q0D2K3 151 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 HLXQ14774 488 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TIGD6Q17RP2 521 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ALKBH6Q3KRA9 238 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 KLHL12Q53G59 568 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 KLHL22Q53GT1 634 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SPATA46Q5T0L3 261 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM244Q5VVB8 128 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 LRRN1Q6UXK5 716 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 UTS2BQ765I0 119 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 DOK3Q7L591 496 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 KRT77Q7Z794 578 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 AMIGO2Q86SJ2 522 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 CBR4Q8N4T8 237 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ACBD7Q8N6N7 88 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 KIR3DL3Q8N743 410 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TCEANCQ8N8B7 351 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SETD9Q8NE22 299 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 BBS1Q8NFJ9 593 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SEMA6DQ8NFY4 1073 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 OR2Z1Q8NG97 314 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 OR56B2PQ8NGI1 322 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 OR51L1Q8NGJ5 315 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SPATA3Q8NHX4 192 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 C8orf46Q8TAG6 207 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TBC1D15Q8TC07 691 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 RPS4Y2Q8TD47 263 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 THEM6Q8WUY1 208 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PYDC1Q8WXC3 89 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PP6455Q8WZ26 134 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 OR5P3Q8WZ94 311 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ST8SIA2Q92186 375 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SLC7A6Q92536 515 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 THRSPQ92748 146 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 STMN2Q93045 179 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 EME1Q96AY2 570 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SPSB1Q96BD6 273 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 AMELYQ99218 206 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 APOL4Q9BPW4 351 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 MICU1Q9BPX6 476 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ADAT1Q9BUB4 502 aaKnown RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 RTL8AQ9BWD3 113 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PKIBQ9C010 78 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SHARPINQ9H0F6 387 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 VCXQ9H320 206 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TPK1Q9H3S4 243 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 RIBC2Q9H4K1 309 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ZMAT3Q9HA38 289 aaKnown RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM165Q9HC07 324 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 CENPMQ9NSP4 180 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 FAM118AQ9NWS6 357 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 HIF1ANQ9NWT6 349 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 IMPAD1Q9NX62 359 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SMPD3Q9NY59 655 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF319Q9P2F9 582 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 ERVK-18Q9QC07 812 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 SLC22A13Q9Y226 551 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 RPL36Q9Y3U8 105 aaKnown RBP4.09□□□□□ -1.75
PTCD3-213ENST00000480102 V9GYS6 101 aa4.09□□□□□ -1.75
PTCD3-213ENST00000480102 PRR14LQ5THK1 2151 aa4.09□□□□□ -1.76
PTCD3-213ENST00000480102 STAB1Q9NY15 2570 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 KIR2DS1A0A191URI9 304 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1W2PQL4 384 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CEACAM18A8MTB9 384 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 INAFM1C9JVW0 142 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 LOC110117498-PIK3R3F6TDL0 507 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms