RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NARFLQ9H6Q4 476 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 TRIM45Q9H8W5 580 aaPredicted RBP3.43□□□□□ -1.86
RFC4-212ENST00000479307 NHEJ1Q9H9Q4 299 aaPredicted RBP3.43□□□□□ -1.86
RFC4-212ENST00000479307 FOLH1BQ9HBA9 442 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 DIABLOQ9NR28 239 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 PLSCR3Q9NRY6 295 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 TREM2Q9NZC2 230 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 CTSFQ9UBX1 484 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 STAP1Q9ULZ2 295 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 AP3M1Q9Y2T2 418 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 RPL36Q9Y3U8 105 aaKnown RBP3.43□□□□□ -1.86
RFC4-212ENST00000479307 CDH10Q9Y6N8 788 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 V9GY05 133 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 HEATR5AQ86XA9 2040 aa3.43□□□□□ -1.86
RFC4-212ENST00000479307 A0A0J9YXY3 114 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 A0A1B0GX78 115 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 RGS16O15492 202 aaPredicted RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 MED7O43513 233 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 UGT1A9O60656 530 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 RAMP3O60896 148 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 ZNF780AO75290 641 aaPredicted RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 SNRNP200O75643 2136 aaKnown RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 ATP5LO75964 103 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 SEMA3DO95025 777 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 DIRAS1O95057 198 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 LGI1O95970 557 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 FGF4P08620 206 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 ZNF7P17097 686 aaPredicted RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 RAB4AP20338 218 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 PHBP35232 272 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 KIR2DS4P43632 304 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 PRRX1P54821 245 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 AIF1P55008 147 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 HPCAP84074 193 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 XRCC4Q13426 336 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 ARFRP1Q13795 201 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 GRB7Q14451 532 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 CLEC12BQ2HXU8 276 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 NSUN5P1Q3KNT7 163 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 PARP15Q460N3 678 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 DNAL1Q4LDG9 190 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 SAMD4BQ5PRF9 694 aaKnown RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 C6orf183Q5T699 404 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 HENMT1Q5T8I9 393 aaKnown RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 LRRC66Q68CR7 880 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 DUPD1Q68J44 220 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 DEGS2Q6QHC5 323 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 METAP1DQ6UB28 335 aaPredicted RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 SHISA6Q6ZSJ9 500 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 FAM183BPQ6ZVS7 135 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 TRMT10CQ7L0Y3 403 aaKnown RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 STRADAQ7RTN6 431 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 ZNF547Q8IVP9 402 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 EIF1ADQ8N9N8 165 aaKnown RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 BHLHE23Q8NDY6 225 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 LINC01560Q8TB33 94 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 PAGE5Q96GU1 130 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 CLCC1Q96S66 551 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 CYTH2Q99418 400 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 RIOK2Q9BVS4 552 aaKnown RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 OR2AG1Q9H205 316 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 ASB8Q9H765 288 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 MRPS30Q9NP92 439 aaKnown RBP3.42□□□□□ -1.86
RFC4-212ENST00000479307 IL26Q9NPH9 171 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 OR12D3Q9UGF7 316 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 KIF25Q9UIL4 384 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 ASF1AQ9Y294 204 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 COQ4Q9Y3A0 265 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 PPIL1Q9Y3C6 166 aa3.42□□□□□ -1.86
RFC4-212ENST00000479307 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 MALRD1Q5VYJ5 2156 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 DNAH7Q8WXX0 4024 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 A0A096LNT2 108 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 TRPC5OSA6NMA1 111 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 CDC40O60508 579 aaKnown RBP eCLIP3.41□□□□□ -1.86
RFC4-212ENST00000479307 CLDN9O95484 217 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 KRT75O95678 551 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 HPNP05981 417 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 DUX4L4P0CJ87 422 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 ICAM2P13598 275 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 ELK1P19419 428 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 IL12AP29459 219 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 PRDX3P30048 256 aaKnown RBP3.41□□□□□ -1.86
RFC4-212ENST00000479307 SHMT2P34897 504 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 STC1P52823 247 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 ATP5J2P56134 94 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 AP1S2P56377 157 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 VSX2P58304 361 aaPredicted RBP3.41□□□□□ -1.86
RFC4-212ENST00000479307 RELAQ04206 551 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 DDX39BQ13838 428 aaKnown RBP3.41□□□□□ -1.86
RFC4-212ENST00000479307 TMEM249Q2WGJ8 235 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 DEFB110Q30KQ9 67 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 SLC25A25Q6KCM7 469 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 RWDD4Q6NW29 188 aaKnown RBP3.41□□□□□ -1.86
RFC4-212ENST00000479307 H3F3CQ6NXT2 135 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 HSDL2Q6YN16 418 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 RDH10Q8IZV5 341 aa3.41□□□□□ -1.86
RFC4-212ENST00000479307 NKAPP1Q8N9T2 125 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms