RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 UBQLN2Q9UHD9 624 aa7.33□□□□□ -1.24
VPS45-208ENST00000478999 SLC23A1Q9UHI7 598 aa7.33□□□□□ -1.24
VPS45-208ENST00000478999 ZNF391Q9UJN7 358 aa7.33□□□□□ -1.24
VPS45-208ENST00000478999 ANAPC10Q9UM13 185 aa7.33□□□□□ -1.24
VPS45-208ENST00000478999 FLVCR2Q9UPI3 526 aa7.33□□□□□ -1.24
VPS45-208ENST00000478999 MAB21L2Q9Y586 359 aa7.33□□□□□ -1.24
VPS45-208ENST00000478999 LIPGQ9Y5X9 500 aa7.33□□□□□ -1.24
VPS45-208ENST00000478999 A0A1B0GTI1 187 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 A0A1B0GW55 424 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 PLSCR5A0PG75 271 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 G3V3Q6 166 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 AQP7O14520 342 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 CA11O75493 328 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 MTRF1O75570 445 aaKnown RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 CD3DP04234 171 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 AMY2AP04746 511 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 QDPRP09417 244 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DUX4L2P0CJ85 424 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DUX4L3P0CJ86 424 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DUX4L4P0CJ87 422 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DUX4L5P0CJ88 424 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DUX4L6P0CJ89 424 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DUX4L7P0CJ90 424 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 HLA-GP17693 338 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 ANXA7P20073 488 aaKnown RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 NFYAP23511 347 aaPredicted RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 OTX1P32242 354 aaPredicted RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 SFTPDP35247 375 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 ZNF93P35789 620 aaPredicted RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 CX3CR1P49238 355 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 ZNF121P58317 390 aaPredicted RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 RAC3P60763 192 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 MRPS34P82930 218 aaKnown RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 STK11Q15831 433 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 ZNF260Q3ZCT1 412 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 LGALSLQ3ZCW2 172 aaPredicted RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 ESCO2Q56NI9 601 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 RNASE10Q5GAN6 216 aaKnown RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 RAET1LQ5VY80 246 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 LIN54Q6MZP7 749 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 IDO2Q6ZQW0 420 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 BIVMQ86UB2 503 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 FTMTQ8N4E7 242 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 RPRMLQ8N4K4 120 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 OR11H4Q8NGC9 324 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 OR9K2Q8NGE7 335 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 OR8B12Q8NGG6 310 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 OR4D6Q8NGJ1 314 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 OR52H1Q8NGJ2 320 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 OR51A2Q8NGJ7 313 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 NINJ1Q92982 152 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DNAJA3Q96EY1 480 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 SCGB3A2Q96PL1 93 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 SEC22CQ9BRL7 303 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 URM1Q9BTM9 101 aaKnown RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 EMC6Q9BV81 110 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 CNTD2Q9H8S5 307 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 ZDHHC11Q9H8X9 412 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 PNRC2Q9NPJ4 139 aaKnown RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 IFT46Q9NQC8 304 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 MED9Q9NWA0 146 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 PIPOXQ9P0Z9 390 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 DUX4Q9UBX2 424 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 CGGBP1Q9UFW8 167 aaPredicted RBP7.32□□□□□ -1.24
VPS45-208ENST00000478999 OPN4Q9UHM6 478 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 HRH3Q9Y5N1 445 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
VPS45-208ENST00000478999 A0A1W2PNR3 127 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 L7N2F9 121 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 DHHO43323 396 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 HOXD4P09016 255 aaPredicted RBP7.31□□□□□ -1.24
VPS45-208ENST00000478999 CELA3AP09093 270 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 VSIG10L2P0DP72 767 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 VSIG8P0DPA2 414 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 RPA2P15927 270 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 NAT1P18440 290 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 SELENOPP49908 381 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 AP2S1P53680 142 aaPredicted RBP7.31□□□□□ -1.24
VPS45-208ENST00000478999 CLDN17P56750 224 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 SEC61A1P61619 476 aaKnown RBP7.31□□□□□ -1.24
VPS45-208ENST00000478999 SNRPD2P62316 118 aaKnown RBP7.31□□□□□ -1.24
VPS45-208ENST00000478999 GUCA2AQ02747 115 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 TFF3Q07654 80 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 PLA2G7Q13093 441 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 OPCMLQ14982 345 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 RAB35Q15286 201 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 NRN1LQ496H8 165 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 C4orf46Q504U0 113 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 C6orf183Q5T699 404 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 RIPPLY2Q5TAB7 128 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 NSUN5P2Q63ZY6 315 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 AWAT2Q6E213 333 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 TMEM65Q6PI78 240 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 CORO6Q6QEF8 472 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 CHMP1BQ7LBR1 199 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 ABHD12BQ7Z5M8 362 aaPredicted RBP7.31□□□□□ -1.24
VPS45-208ENST00000478999 NAA40Q86UY6 237 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 DMRTC2Q8IXT2 367 aaPredicted RBP7.31□□□□□ -1.24
VPS45-208ENST00000478999 C20orf196Q8IYI0 205 aa7.31□□□□□ -1.24
VPS45-208ENST00000478999 TMEM123Q8N131 208 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms