RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 EML2O95834 649 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 BLKP51451 505 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 ST3GAL3Q11203 375 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 TCEA2Q15560 299 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 RPUSD3Q6P087 351 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 LEG1Q6P5S2 330 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 OPN5Q6U736 354 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 GPR32P1Q8NGA4 272 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 CCL4L1Q8NHW4 92 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 SMIM19Q96E16 107 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 TBX15Q96SF7 602 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 GPA33Q99795 319 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 WSB2Q9NYS7 404 aaPredicted RBP11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 ST6GALNAC2Q9UJ37 374 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 A0A0A6YYD5 115 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 MSGN1A6NI15 193 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 ERI3O43414 337 aaKnown RBP11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 GALR2O43603 387 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 TFF2Q03403 129 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 RBPJQ06330 500 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 GAS6Q14393 721 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC22A6Q4U2R8 563 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 COMMD2Q86X83 199 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 CPOQ8IVL8 374 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 STPG4Q8N801 248 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 TMEM99Q8N816 258 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 OR4S2Q8NH73 311 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 GPX8Q8TED1 209 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 GPR174Q9BXC1 333 aa11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 PNO1Q9NRX1 252 aaKnown RBP11.22□□□□□ -0.61
RTFDC1-207ENST00000477573 KIR2DS5A0A0G2JLQ3 304 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 A0A0G2JNG1 304 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 H0YIZ8 118 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 KIR2DS3K7RE56 304 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 ETV2O00321 342 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 TMPRSS11DO60235 418 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 SEC11BP0C7V7 166 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 HIST1H1TP22492 207 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF41P51814 821 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 COL10A1Q03692 680 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 KIR2DS5Q14953 304 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 MLC1Q15049 377 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 PGGHGQ32M88 737 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 ABHD17CQ6PCB6 329 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 MEPCEQ7L2J0 689 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 ZDHHC22Q8N966 263 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 ZCCHC14Q8WYQ9 949 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 C4orf36Q96KX1 117 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 IMMP2LQ96T52 175 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 ELL3Q9HB65 397 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 C19orf53Q9UNZ5 99 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 ENTPD2Q9Y5L3 495 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 TRIOBPQ9H2D6 2365 aa11.21□□□□□ -0.61
RTFDC1-207ENST00000477573 SPTY2D1-AS1A0A0U1RR47 76 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 LOC100289279A0A1B0GTE1 492 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 A0A1W2PPC4 97 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF705FA8MVS1 300 aaPredicted RBP11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 C17orf105B2RV13 164 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 SOCS6O14544 535 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 TNFSF15O95150 251 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 CYC1P08574 325 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF705DP0CH99 300 aaPredicted RBP11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF705BP0CI00 300 aaPredicted RBP11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 CTSEP14091 401 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 NTSP30990 170 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 FRKP42685 505 aaPredicted RBP11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 RPS26P62854 115 aaKnown RBP11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 IL13RA1P78552 427 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 NR0B2Q15466 257 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 SELENOHQ8IZQ5 122 aaKnown RBP11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 OR5AK3PQ8NH89 298 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 GPR146Q96CH1 333 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 NEURL3Q96EH8 262 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 GFI1Q99684 422 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 OR11A1Q9GZK7 315 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 SLCO5A1Q9H2Y9 848 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 PLK3Q9H4B4 646 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 CAPN10Q9HC96 672 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 RAB22AQ9UL26 194 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 EYSQ5T1H1 3165 aa11.21□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF860A6NHJ4 632 aa11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 HSD17B6O14756 317 aa11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 SNRNP200O75643 2136 aaKnown RBP11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 PRSS3P35030 304 aa11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 RPS15P62841 145 aaKnown RBP11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 EBPQ15125 230 aaKnown RBP11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 BSXQ3C1V8 233 aa11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 EXOSC6Q5RKV6 272 aaKnown RBP11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 RTL6Q6ICC9 239 aa11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
RTFDC1-207ENST00000477573 SLC22A18ASQ8N1D0 253 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms