RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 SSX2Q16385 188 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 ARSJQ5FYB0 599 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-219ENST00000476625 TEX30Q5JUR7 227 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 ZNF770Q6IQ21 691 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-219ENST00000476625 HAGHLQ6PII5 290 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-219ENST00000476625 HACD2Q6Y1H2 254 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 THAP5Q7Z6K1 395 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 TIGD4Q8IY51 512 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 CSNK2A3Q8NEV1 391 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 OR2T27Q8NH04 317 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 SDSLQ96GA7 329 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 INTS14Q96SY0 518 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 ARGLU1Q9NWB6 273 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-219ENST00000476625 IL20Q9NYY1 176 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 MPC1Q9Y5U8 109 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 FAM90A8PA6NJQ4 464 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 PRR32B1ATL7 298 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 SLC22A2O15244 555 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 GSTT1P30711 240 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 VDAC2P45880 294 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-219ENST00000476625 SLC15A1P46059 708 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 SLC25A1P53007 311 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 LGALS4P56470 323 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 FAM76BQ5HYJ3 339 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 ACP7Q6ZNF0 438 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 MOB3CQ70IA8 216 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 AQP11Q8NBQ7 271 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 OR5AU1Q8NGC0 362 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 AQP3Q92482 292 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 OCSTAMPQ9BR26 566 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 RAB18Q9NP72 206 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 OR14J1Q9UGF5 321 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 HILPDAQ9Y5L2 63 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 U3KQV3 271 aa9.61□□□□□ -0.87
HDAC6-219ENST00000476625 A6NIN4 97 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 ODF3BA8MYP8 253 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 TNFRSF11BO00300 401 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 PEX14O75381 377 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 MTRF1O75570 445 aaKnown RBP9.6□□□□□ -0.87
HDAC6-219ENST00000476625 CCDC159P0C7I6 412 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 PF4V1P10720 104 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 ATP6V1B2P21281 511 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 SMIM11AP58511 58 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 CD83Q01151 205 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 AANATQ16613 207 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 BAIAP2L2Q6UXY1 529 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 RASSF6Q6ZTQ3 369 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 TCF23Q7RTU1 214 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 HDXQ7Z353 690 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 WFDC9Q8NEX5 89 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 OR52H1Q8NGJ2 320 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 THEM6Q8WUY1 208 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 NIPSNAP1Q9BPW8 284 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 PRSS22Q9GZN4 317 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 OR51V1Q9H2C8 321 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 GORASP2Q9H8Y8 452 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 SPAG4Q9NPE6 437 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 INPP5EQ9NRR6 644 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 CD300AQ9UGN4 299 aa9.6□□□□□ -0.87
HDAC6-219ENST00000476625 VGLL3A8MV65 326 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 CCNB2O95067 398 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 FAHP16930 419 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 PRDX2P32119 198 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 IFNGR2P38484 337 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 CD69Q07108 199 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 DYNC1I2Q13409 638 aaKnown RBP9.59□□□□□ -0.87
HDAC6-219ENST00000476625 CYP2R1Q6VVX0 501 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 C18orf65Q6ZTR6 163 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 CPLX4Q7Z7G2 160 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 TPRX1Q8N7U7 411 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 PAPD5Q8NDF8 572 aaKnown RBP9.59□□□□□ -0.87
HDAC6-219ENST00000476625 BBS1Q8NFJ9 593 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 MYDGFQ969H8 173 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 MCUR1Q96AQ8 359 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 HEXA-AS1Q9H8Q6 139 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 IL1RAPQ9NPH3 570 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 ABCB10Q9NRK6 738 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 MRGBPQ9NV56 204 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 USE1Q9NZ43 259 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 LRP12Q9Y561 859 aa9.59□□□□□ -0.87
HDAC6-219ENST00000476625 C17orf98A8MV24 154 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 F8VVB4 439 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 F8VWA3 439 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 GLCEO94923 617 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 INMTO95050 263 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 PF4P02776 101 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 LYNP07948 512 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 CFL1P23528 166 aaKnown RBP9.58□□□□□ -0.88
HDAC6-219ENST00000476625 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
HDAC6-219ENST00000476625 GNG3P63215 75 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 MFGE8Q08431 387 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-219ENST00000476625 CEACAM21Q3KPI0 293 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 KHDC1LQ5JSQ8 128 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 PLCXD3Q63HM9 321 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 PLBD1Q6P4A8 553 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 TRPM8Q7Z2W7 1104 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 POC1AQ8NBT0 407 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 FAM81AQ8TBF8 368 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms