RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DKK4Q9UBT3 224 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 JPT1Q9UK76 154 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 WIPI2Q9Y4P8 454 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 FNDC1Q4ZHG4 1894 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 SHROOM3Q8TF72 1996 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 WDR90Q96KV7 1748 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SERINC4A6NH21 518 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 FAM90A20PA6NIJ5 464 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SLC38A8A6NNN8 435 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 FAM166BA8MTA8 275 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 FTCDNL1E5RQL4 147 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 CLDN34H7C241 214 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 RAB27BO00194 218 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 GAPDHSO14556 408 aaPredicted RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 HSD17B6O14756 317 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 ST8SIA3O43173 380 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SNAI2O43623 268 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 RAD51DO75771 328 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 TIAF1O95411 115 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SEMA4FO95754 770 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 GBAP04062 536 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 OR4Q2P0C623 313 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LIMS3P0CW19 117 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LIMS4P0CW20 117 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 EGR1P18146 543 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LMO1P25800 156 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 CD34P28906 385 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 GABRA3P34903 492 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 PIGPP57054 158 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 TAS2R30P59541 319 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LILRA4P59901 499 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 DMWDQ09019 674 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 ZP4Q12836 540 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SRSF6Q13247 344 aaKnown RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 DHRS2Q13268 280 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 CTBP1Q13363 440 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LTC4SQ16873 150 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 C18orf21Q32NC0 220 aaPredicted RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 ACOT6Q3I5F7 207 aaPredicted RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 IFI44LQ53G44 452 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LRRC10Q5BKY1 277 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LRRC73Q5JTD7 316 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 PHF19Q5T6S3 580 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 Q6ZN92 141 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 MRGPRGQ86SM5 289 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 LRP11Q86VZ4 500 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 APOBEC3FQ8IUX4 373 aaKnown RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 ZNF101Q8IZC7 436 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 C10orf111Q8N326 155 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 PNKDQ8N490 385 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 C5orf17Q8NAS9 161 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SLC16A11Q8NCK7 471 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 C2CD4AQ8NCU7 369 aaPredicted RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 OR13C9Q8NGT0 318 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 OR10X1Q8NGY0 326 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 ZNF417Q8TAU3 575 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SLC25A43Q8WUT9 341 aaPredicted RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 TMEM170AQ8WVE7 144 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 SLC25A38Q96DW6 304 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 GNRHR2Q96P88 292 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 PGLYRP2Q96PD5 576 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 MACROD1Q9BQ69 325 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 DOHHQ9BU89 302 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 DPY30Q9C005 99 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 TMEM39BQ9GZU3 492 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 CDIP1Q9H305 208 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 OR52D1Q9H346 318 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 RDH14Q9HBH5 336 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 MMP17Q9ULZ9 603 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 PSG8Q9UQ74 426 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 PATJQ8NI35 1801 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 TNRC6CQ9HCJ0 1690 aaKnown RBP3.67□□□□□ -1.82
CD55-208ENST00000476590 ADAMTS7Q9UKP4 1686 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 PIKFYVEQ9Y2I7 2098 aa3.67□□□□□ -1.82
CD55-208ENST00000476590 hCG_38984A0A1B0GV85 526 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 FAM90A18PA6NE21 464 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 FAM90A16PA6NEW6 464 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 FAM90A9PA6NNJ1 464 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 FAM90A5PA8MXJ8 464 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 H7BYZ3 331 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 J3QR06 171 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 ETV2O00321 342 aaPredicted RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 YPEL1O60688 119 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 TRAPPC6AO75865 159 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 KLF8O95600 359 aaPredicted RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 HAND1O96004 215 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 H1F0P07305 194 aaKnown RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 FAM87AP0C7U9 286 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 FAM90A15PP0C7V4 464 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 FAM90A14PP0C7W9 464 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 GNB3P16520 340 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 HOXB9P17482 250 aaPredicted RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 CD22P20273 847 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 CD27P26842 260 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 HOXC9P31274 260 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 OR1D2P34982 312 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 FASLGP48023 281 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 MTNR1AP48039 350 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 PRLHRP49683 370 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms