RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 BLMHQ13867 455 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 DGUOKQ16854 277 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 CEP78Q5JTW2 689 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 NCR3LG1Q68D85 454 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 MEPCEQ7L2J0 689 aaKnown RBP16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 OR51E1Q8TCB6 317 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 SIRT7Q9NRC8 400 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 KRT84Q9NSB2 600 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 RASL12Q9NYN1 266 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 ENOPH1Q9UHY7 261 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 PIGLQ9Y2B2 252 aa16.73■□□□□ 0.27
PDLIM4-206ENST00000474421 A0A1W2PQ09 198 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 RHBDL1O75783 438 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 DHRS3O75911 302 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 GABRA2P47869 451 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 RELBQ01201 579 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 PLCXD3Q63HM9 321 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 MOB3CQ70IA8 216 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 METTL8Q9H825 291 aaKnown RBP16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 COPS3Q9UNS2 423 aa16.72■□□□□ 0.27
PDLIM4-206ENST00000474421 MEGF8Q7Z7M0 2845 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 TRBV23-1A0A0A0MS06 115 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 G3V2T6 193 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 NPFFO15130 113 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 PSG2P11465 335 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 ATP6AP1Q15904 470 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 ZNF684Q5T5D7 378 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 NXNL2Q5VZ03 156 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 HAGHLQ6PII5 290 aaPredicted RBP16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 ZNF322Q6U7Q0 402 aaPredicted RBP16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 Q8N7P7 452 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 AQP3Q92482 292 aa16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 CADM1Q9BY67 442 aaKnown RBP16.71■□□□□ 0.27
PDLIM4-206ENST00000474421 IGKV1D-17A0A075B6S4 117 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 PRR32B1ATL7 298 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 ZNF670-ZNF695F2Z2N8 137 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 LOC110117498-PIK3R3F6TDL0 507 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 RNASEK-C17orf49H0YIS7 233 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 PAHP00439 452 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 NRASP01111 189 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 FAHP16930 419 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 RASSF2P50749 326 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 UBE2E1P51965 193 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 CXCR4P61073 352 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 EGR3Q06889 387 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 ACSM1Q08AH1 577 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 SMIM21Q3B7S5 101 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 BCL2L15Q5TBC7 163 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 SLX4IPQ5VYV7 408 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 BRICD5Q6PL45 260 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 ZNF573Q86YE8 665 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 ZDHHC13Q8IUH4 622 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 GID4Q8IVV7 300 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 SLC35F2Q8IXU6 374 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 TCEANCQ8N8B7 351 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 TMEM163Q8TC26 289 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 SDSLQ96GA7 329 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 CLN6Q9NWW5 311 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 ZNRD1Q9P1U0 126 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 ZNF222Q9UK12 451 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 GTF2A1LQ9UNN4 478 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 RNF114Q9Y508 228 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 R4GMQ9 66 aa16.7■□□□□ 0.26
PDLIM4-206ENST00000474421 ZAR1LA6NP61 321 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 WIPF1O43516 503 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 TTRP02766 147 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 FASP25445 335 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 MFGE8Q08431 387 aaPredicted RBP16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 CLVS2Q5SYC1 327 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 AADACL4Q5VUY2 407 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 TMEM185AQ8NFB2 350 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 OR5D13Q8NGL4 314 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 OR5R1Q8NH85 324 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 TNFRSF14Q92956 283 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 DUS3LQ96G46 650 aaKnown RBP16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 CITED1Q99966 193 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 TTTY10Q9BZA0 68 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 ADGRL4Q9HBW9 690 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 POLDIP2Q9Y2S7 368 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 SNX5Q9Y5X3 404 aa16.69■□□□□ 0.26
PDLIM4-206ENST00000474421 A0A1W2PPH5 198 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 MEIOCA2RUB1 952 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 DHRS7CA6NNS2 312 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 DLGAP1O14490 977 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 TFF1P04155 84 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 FCGR1AP12314 374 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 CAPZA1P52907 286 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 EFNB1P98172 346 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 BNIP1Q12981 228 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 OCLNQ16625 522 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 C12orf73Q69YU5 71 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 KDM4DQ6B0I6 523 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 ELMOD2Q8IZ81 293 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 ZSCAN4Q8NAM6 433 aaPredicted RBP16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 POC1AQ8NBT0 407 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 ZNRF1Q8ND25 227 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 APOL4Q9BPW4 351 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 GABARAPL1Q9H0R8 117 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 FAM53CQ9NYF3 392 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms