RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LOC100653049A0A140TA62 436 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TCRBV3S1A0A5B6 114 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 EFCAB10A6NFE3 127 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 HIDE1A8MVS5 230 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 F8W036 122 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 NUPL2O15504 423 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TNFSF13O75888 250 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 KRT34O76011 436 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 SRP72O76094 671 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 GABARAPO95166 117 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 SNAI1O95863 264 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TGM6O95932 706 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 BGLAPP02818 100 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 SERPINE1P05121 402 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF30P17039 623 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 NELFEP18615 380 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 SLC1A2P43004 574 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 MARCKSL1P49006 195 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 NUDT2P50583 147 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 CRISP1P54107 249 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 FGF8P55075 233 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 CARD18P57730 90 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 RAB25P57735 213 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 PRKCDQ05655 676 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 ART3Q13508 389 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 PDK2Q15119 407 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 ANGPT1Q15389 498 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 UBE2SQ16763 222 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 KCTD19Q17RG1 926 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TTLL9Q3SXZ7 439 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 XAF1Q6GPH4 301 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TEX43Q6ZNM6 134 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 C6orf120Q7Z4R8 191 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 RAB43Q86YS6 212 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 NKAIN4Q8IVV8 208 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TCTE3Q8IZS6 198 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TMEM35BQ8NCS4 154 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 BPIFB6Q8NFQ5 453 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 NPBQ8NG41 125 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 OR4S2Q8NH73 311 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 CD300LFQ8TDQ1 290 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 MITD1Q8WV92 249 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 DEDD2Q8WXF8 326 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TMEM230Q96A57 120 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 EXOSC8Q96B26 276 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 PPWD1Q96BP3 646 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 FRMD8P1Q9BZ68 369 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 MRPL37Q9BZE1 423 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 LHX5Q9H2C1 402 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 DSN1Q9H410 356 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TRIM45Q9H8W5 580 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 MRM3Q9HC36 420 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 RETNQ9HD89 108 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 XPNPEP1Q9NQW7 623 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 ABCB10Q9NRK6 738 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 CLN6Q9NWW5 311 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 TRMT112Q9UI30 125 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF256Q9Y2P7 627 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 PRELID3BQ9Y3B1 194 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 ROBO3Q96MS0 1386 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 KIF1AQ12756 1690 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 RIMS1Q86UR5 1692 aaKnown RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 RREB1Q92766 1687 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 KIDINS220Q9ULH0 1771 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 PQLC2LA1A4F0 135 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 TSPAN11A1L157 253 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF99A8MXY4 864 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 SMKR1H3BMG3 65 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 I3L521 148 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 MRPS14O60783 128 aaKnown RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 OR2B3O76000 313 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 SLC22A5O76082 557 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 FARS2O95363 451 aaKnown RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 MBP02144 154 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 C1QBP02746 253 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 STAG3L2P0CL84 134 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 CD1EP15812 388 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 SPNP16150 400 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 CNR1P21554 472 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 HLA-DMAP28067 261 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 GPX4P36969 197 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 GPR1P46091 355 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 OR1G1P47890 313 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 CYB561P49447 251 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 GDI2P50395 445 aaKnown RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 SERPINB9P50453 376 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 PSMD4P55036 377 aaKnown RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 RAB14P61106 215 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 YWHAEP62258 255 aaKnown RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 RPL10AP62906 217 aaKnown RBP2.98□□□□□ -1.93
BRCA1-212ENST00000473961 MXD1Q05195 221 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 MGAT3Q09327 533 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 FADDQ13158 208 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 STX5Q13190 355 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 PON2Q15165 354 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF79Q15937 498 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 Q5BKY6 102 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 HES5Q5TA89 166 aa2.98□□□□□ -1.93
BRCA1-212ENST00000473961 EPGNQ6UW88 154 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms