RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 GINS4Q9BRT9 223 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 HDHD3Q9BSH5 251 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 CHST6Q9GZX3 395 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 GHITMQ9H3K2 345 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 GP6Q9HCN6 339 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 RABL2AQ9UBK7 228 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 RABL2BQ9UNT1 228 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 MSRB2Q9Y3D2 182 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 AHRRA9YTQ3 701 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 F8VVB4 439 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 F8VWA3 439 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 K7ENP7 123 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 RAB3DO95716 219 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CYB5AP00167 134 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 AMY2AP04746 511 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 RLN1P04808 185 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CSF1P09603 554 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 AKAIN1P0CW23 69 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 HIST1H1DP16402 221 aaKnown RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 SELEP16581 610 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 ZNF14P17017 642 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 NPBWR2P48146 333 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 RRAS2P62070 204 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 MALLQ13021 153 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 ARFRP1Q13795 201 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 RSU1Q15404 277 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CNN3Q15417 329 aaKnown RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 SCGB2B2Q4G0G5 96 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 NSUN5P2Q63ZY6 315 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 INO80CQ6PI98 192 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 C17orf107Q6ZR85 190 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 SLC25A26Q70HW3 274 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 C15orf40Q8WUR7 153 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CAPSLQ8WWF8 208 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 SPSB1Q96BD6 273 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 WBP1Q96G27 269 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 SLC6A7Q99884 636 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CST11Q9H112 138 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 OR51J1Q9H342 316 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 GLRX2Q9NS18 164 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 IL36RNQ9UBH0 155 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 KCNN3Q9UGI6 736 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 FZR1Q9UM11 496 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 SSUH2Q9Y2M2 353 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 FAM221AA4D161 298 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 DHRS7CA6NNS2 312 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CD300LBA8K4G0 201 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 ZNF736B4DX44 427 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 WDR1O75083 606 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 PMP2P02689 132 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 COX5BP10606 129 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 GNG2P59768 71 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 BTG1P62324 171 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CXADRP78310 365 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 TGFBR3Q03167 851 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 RAB12Q6IQ22 244 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 FAM180AQ6UWF9 173 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 OR2W3Q7Z3T1 314 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 WDR31Q8NA23 367 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 OR11H7Q8NGC8 314 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 OR6K3Q8NGY3 331 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 OR51F2Q8NH61 342 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 NANOS1Q8WY41 292 aaKnown RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 SNAPC3Q92966 411 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 ZNF488Q96MN9 340 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 URM1Q9BTM9 101 aaKnown RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 OR2J1Q9GZK6 312 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 RGCCQ9H4X1 137 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 NPAP1Q9NZP6 1156 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 FBLN5Q9UBX5 448 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 TINAGQ9UJW2 476 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 PROCRQ9UNN8 238 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 A0A0A6YYH2 397 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 C7orf66A4D0T2 115 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 A6NJ64 397 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MFNGO00587 321 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 GEMIN2O14893 280 aaKnown RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 PEX14O75381 377 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 NDUFB6O95139 128 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CGAP01215 116 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 VSIG10L2P0DP72 767 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CA6P23280 308 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 RCVRNP35243 200 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 HRH1P35367 487 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 PTGER4P35408 488 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 TAS2R19P59542 299 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ACTBP60709 375 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ACTG1P63261 375 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 HOXA4Q00056 320 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 SIGIRRQ6IA17 410 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 IDO2Q6ZQW0 420 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 TMED4Q7Z7H5 227 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 FBXL14Q8N1E6 418 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 BPIFB2Q8N4F0 458 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF611Q8N823 705 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 SLAMF9Q96A28 289 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 C10orf35Q96D05 121 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 WDR89Q96FK6 387 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 ST6GALNAC5Q9BVH7 336 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MED28Q9H204 178 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms