RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ZMYND19Q96E35 227 aaPredicted RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 MED8Q96G25 268 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 MAGEB18Q96M61 343 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 COL21A1Q96P44 957 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 GPR21Q99679 349 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 DHRS9Q9BPW9 319 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 AIF1LQ9BQI0 150 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF717Q9BY31 904 aaPredicted RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 PECRQ9BY49 303 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 NMUR2Q9GZQ4 415 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TPK1Q9H3S4 243 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 CLMPQ9H6B4 373 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 NT5DC2Q9H857 520 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 EHFQ9NZC4 300 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF225Q9UK10 706 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 HHLA2Q9UM44 414 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 C14orf166Q9Y224 244 aaKnown RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF256Q9Y2P7 627 aaPredicted RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 L3MBTL1Q9Y468 752 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 SNX10Q9Y5X0 201 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 CENPVL3A0A0U1RRI6 287 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 DAPL1A0PJW8 107 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 IGLON5A6NGN9 336 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 CLDN24A6NM45 220 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 MIF4GDA9UHW6 222 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 TSTD3H0UI37 97 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 K7EMT4 169 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 ARPC5O15511 151 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RAD51CO43502 376 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 OR2B3O76000 313 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC22A5O76082 557 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 PPBPP02775 128 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 PCCAP05165 728 aaPredicted RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 OR5AL1P0C617 328 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RPL12P30050 165 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 PYCR1P32322 319 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 GALR1P47211 349 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 SUB1P53999 127 aaKnown RBP eCLIP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RBX1P62877 108 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RPL32P62910 135 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 ARG2P78540 354 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC25A11Q02978 314 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RUNX3Q13761 415 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF235Q14590 738 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 CYP51A1Q16850 503 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 C4orf26Q17RF5 130 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 FHL5Q5TD97 284 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 NPSR1Q6W5P4 371 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 CYHR1Q6ZMK1 362 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 TMUB2Q71RG4 321 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 CBLN2Q8IUK8 224 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC30A8Q8IWU4 369 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 CLDN22Q8N7P3 220 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF557Q8N988 423 aaPredicted RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 TMEM161BQ8NDZ6 487 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 GPR32P1Q8NGA4 272 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 OR4K17Q8NGC6 315 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 OR56B4Q8NH76 319 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RNASE11Q8TAA1 199 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 FNDC8Q8TC99 324 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 PCNPQ8WW12 178 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 FGGYQ96C11 551 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 IMP4Q96G21 291 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 MRAP2Q96G30 205 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 OR10C1Q96KK4 312 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM210BQ96KR6 192 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 ZIM3Q96PE6 472 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 P2RX4Q99571 388 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RARRES2Q99969 163 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RASL11BQ9BPW5 248 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 KCTD14Q9BQ13 255 aaPredicted RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 BOLA2Q9H3K6 86 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 UGT1A8Q9HAW9 530 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 EXOSC4Q9NPD3 245 aaKnown RBP3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 ABCC13Q9NSE7 274 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 VPS29Q9UBQ0 182 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 CIDEBQ9UHD4 219 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RWDD2AQ9UIY3 292 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 VPREB3Q9UKI3 123 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 TP53TG1Q9Y2A0 90 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 OR51B2Q9Y5P1 312 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 CAMSAP1Q5T5Y3 1602 aa3.54□□□□□ -1.84
PRPF40A-206ENST00000471167 RFX7Q2KHR2 1363 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 OR11H12B2RN74 326 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 LOC110117498-PIK3R3F6TDL0 507 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 F6UB75 175 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 M0R1B8 84 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 GABRPO00591 440 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 RTL8CO15255 209 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC31A2O15432 143 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 MBTPS2O43462 519 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM189A1O60320 539 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 ICOSLGO75144 302 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 SUPT3HO75486 399 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 KLF8O95600 359 aaPredicted RBP3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 NUDT14O95848 222 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 AKR1C4P17516 323 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 UBE2E1P51965 193 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 AP1S2P56377 157 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 OR12D2P58182 307 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms