RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZNF649Q9BS31 505 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 ADI1Q9BV57 179 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 AMBNQ9NP70 447 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 GPR173Q9NS66 373 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 FRRS1LQ9P0K9 344 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 MYRFQ9Y2G1 1151 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 RPL36Q9Y3U8 105 aaKnown RBP11.74□□□□□ -0.53
TOP3B-215ENST00000470338 PQLC2LA1A4F0 135 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 A6NIN4 97 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 CASQ2O14958 399 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 FADS2O95864 444 aaKnown RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ISG15P05161 165 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 LIPFP07098 398 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 UBCP0CG48 685 aaKnown RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 PEX2P28328 305 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 CCR9P51686 369 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 NANOS3P60323 173 aaKnown RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ACTA2P62736 377 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ACTG2P63267 376 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 KLHL22Q53GT1 634 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ARMCX4Q5H9R4 360 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF691Q5VV52 312 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 HAGHLQ6PII5 290 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 SLC36A1Q7Z2H8 476 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 LHFPL3Q86UP9 236 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF573Q86YE8 665 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 PHC2Q8IXK0 858 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 SYS1Q8N2H4 156 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ANGPTL6Q8NI99 470 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF418Q8TF45 676 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 UPRTQ96BW1 309 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 C10orf35Q96D05 121 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 PELI1Q96FA3 418 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 MRPL48Q96GC5 212 aaKnown RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-215ENST00000470338 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 DNAJB11Q9UBS4 358 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 NUP50Q9UKX7 468 aa11.73□□□□□ -0.53
TOP3B-215ENST00000470338 A0A1B0GW55 424 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 LOC107986453A0A1B0GWG9 222 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 ANKRD61A6NGH8 418 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 J3QLW9 94 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 NOS1APO75052 506 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-215ENST00000470338 VENTXO95231 258 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 ECDO95905 644 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-215ENST00000470338 HTR1AP08908 422 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4L2P0CJ85 424 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4L3P0CJ86 424 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4L4P0CJ87 422 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4L5P0CJ88 424 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4L6P0CJ89 424 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4L7P0CJ90 424 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF19P17023 458 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 GLRA1P23415 457 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 FPR2P25090 351 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 GMFBP60983 142 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 ADARB1P78563 741 aaKnown RBP11.72□□□□□ -0.53
TOP3B-215ENST00000470338 SMN1Q16637 294 aaKnown RBP11.72□□□□□ -0.53
TOP3B-215ENST00000470338 OGFRL1Q5TC84 451 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-215ENST00000470338 TMEM244Q5VVB8 128 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 TTC23Q5W5X9 447 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4L9Q6RFH8 374 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 BTN2A1Q7KYR7 527 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 RDH10Q8IZV5 341 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 OR52I1Q8NGK6 324 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 C4orf36Q96KX1 117 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 ALG8Q9BVK2 526 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 PLEKHA1Q9HB21 404 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 SNTG1Q9NSN8 517 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 ERVK13-1Q9NX77 482 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 RASL12Q9NYN1 266 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 NLKQ9UBE8 527 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 DUX4Q9UBX2 424 aa11.72□□□□□ -0.53
TOP3B-215ENST00000470338 OR2AT4A6NND4 320 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 H3BSH0 61 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 J3QT63 122 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 GPR37O15354 613 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.53
TOP3B-215ENST00000470338 CLIC3O95833 236 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 ACAA1P09110 424 aaPredicted RBP11.71□□□□□ -0.53
TOP3B-215ENST00000470338 PGA5P0DJD9 388 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 MPZP25189 248 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 HAAOP46952 286 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 HILS1P60008 231 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 UBE2V2Q15819 145 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 FGFRL1Q8N441 504 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 DHRSXQ8N5I4 330 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 FAM216BQ8N7L0 139 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 PNLDC1Q8NA58 520 aaKnown RBP11.71□□□□□ -0.53
TOP3B-215ENST00000470338 POC1AQ8NBT0 407 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 LY6G5BQ8NDX9 201 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 CYGBQ8WWM9 190 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 TMIGD2Q96BF3 282 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 MED30Q96HR3 178 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 DMRTB1Q96MA1 342 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 GAFA1Q96PS6 74 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms