RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SLC25A19Q9HC21 320 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 FAM206AQ9NX38 181 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 IGKV1D-17A0A075B6S4 117 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 SLC22A31A6NKX4 558 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 ZNF254O75437 659 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 PSG2P11465 335 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 PRKACGP22612 351 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 HCCSP53701 268 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 CEP78Q5JTW2 689 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 ZBTB37Q5TC79 503 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 TRPM8Q7Z2W7 1104 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 THAP5Q7Z6K1 395 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 COMMD2Q86X83 199 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 HS3ST5Q8IZT8 346 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 ZNRF1Q8ND25 227 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 BEND2Q8NDZ0 799 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 TMEM185AQ8NFB2 350 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 OR5D13Q8NGL4 314 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 ZNF222Q9UK12 451 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 SF3B6Q9Y3B4 125 aaKnown RBP14.3□□□□□ -0.12
COL7A1-208ENST00000470076 MAB21L2Q9Y586 359 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 TMEM14AQ9Y6G1 99 aa14.3□□□□□ -0.12
COL7A1-208ENST00000470076 ANKRD61A6NGH8 418 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 GSC2O15499 205 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 ROM1Q03395 351 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 RIPPLY1Q0D2K3 151 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 SNAPC1Q16533 368 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 LCN1P1Q5VSP4 162 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 TMEM236Q5W0B7 351 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 ZNF679Q8IYX0 411 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 PNKDQ8N490 385 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 ASB17Q8WXJ9 295 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 DNAJC9Q8WXX5 260 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 AQP3Q92482 292 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 SDSLQ96GA7 329 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 TEAD3Q99594 435 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 PBOV1Q9GZY1 135 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 GPR84Q9NQS5 396 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 RASL12Q9NYN1 266 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 DNAJB9Q9UBS3 223 aa14.29□□□□□ -0.12
COL7A1-208ENST00000470076 H0YAE9 185 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 PSMD9O00233 223 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 IGLV3-1P01715 115 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 CBX1P83916 185 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 ZNF829Q3KNS6 432 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-208ENST00000470076 PLCXD3Q63HM9 321 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 HAGHLQ6PII5 290 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-208ENST00000470076 MOB3CQ70IA8 216 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 SPATA24Q86W54 205 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 OR51E1Q8TCB6 317 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 OR8B4Q96RC9 309 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 FAM234AQ9H0X4 552 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 ELL3Q9HB65 397 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-208ENST00000470076 TVP23BQ9NYZ1 205 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 NUFIP1Q9UHK0 495 aaKnown RBP14.28□□□□□ -0.12
COL7A1-208ENST00000470076 ENPP5Q9UJA9 477 aa14.28□□□□□ -0.12
COL7A1-208ENST00000470076 PRKDCP78527 4128 aaKnown RBP14.27□□□□□ -0.12
COL7A1-208ENST00000470076 MTRF1O75570 445 aaKnown RBP14.27□□□□□ -0.13
COL7A1-208ENST00000470076 MRPL3P09001 348 aaKnown RBP14.27□□□□□ -0.13
COL7A1-208ENST00000470076 FAHP16930 419 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 RIDAP52758 137 aaKnown RBP14.27□□□□□ -0.13
COL7A1-208ENST00000470076 CAPZA1P52907 286 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 EGR3Q06889 387 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 FLOT2Q14254 428 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 C2orf68Q2NKX9 166 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 SMIM21Q3B7S5 101 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 SLC35E4Q6ICL7 350 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 FAM185AQ8N0U4 392 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 OR51G2Q8NGK0 314 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 NRBF2Q96F24 287 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 PPA2Q9H2U2 334 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 FBLN5Q9UBX5 448 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 PIGLQ9Y2B2 252 aa14.27□□□□□ -0.13
COL7A1-208ENST00000470076 TET2Q6N021 2002 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-208ENST00000470076 A0A1W2PPH5 198 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 CCDC182A6NF36 153 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 H3BUX3 64 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 FKBP6O75344 327 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 DHRS3O75911 302 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 TSPAN15O95858 294 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 CRISP1P54107 249 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 DMRTC1Q5HYR2 192 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 ZNF684Q5T5D7 378 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 ACP7Q6ZNF0 438 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 ZNF573Q86YE8 665 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 POC1AQ8NBT0 407 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 OR5K1Q8NHB7 308 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 CNN2Q99439 309 aaKnown RBP14.26□□□□□ -0.13
COL7A1-208ENST00000470076 SSX3Q99909 188 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 PRRG3Q9BZD7 231 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 MOB1AQ9H8S9 216 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 PAPOLBQ9NRJ5 636 aaKnown RBP14.26□□□□□ -0.13
COL7A1-208ENST00000470076 IKZF2Q9UKS7 526 aa14.26□□□□□ -0.13
COL7A1-208ENST00000470076 TCRBV3S1A0A5B6 114 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 RFPL4AA6NLU0 287 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 PRR32B1ATL7 298 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 RFPL4AL1F8VTS6 287 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 SLC1A7O00341 560 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms