RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ZNF708P17019 499 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 IGFBP4P22692 258 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 CRYGSP22914 178 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 AKR1C2P52895 323 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 AKR1C1Q04828 323 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 SPEM2Q0P670 501 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 ZIC4Q8N9L1 334 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 OR9K2Q8NGE7 335 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 NPRL2Q8WTW4 380 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 MAFIPQ8WZ33 124 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 ZNF799Q96GE5 643 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 PIGQQ9BRB3 760 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 TLNRD1Q9H1K6 362 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 C1orf123Q9NWV4 160 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 EDARQ9UNE0 448 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
BRCA1-209ENST00000470026 PIGLQ9Y2B2 252 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 CACNA1EQ15878 2313 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 IGHV1-45A0A0A0MS14 117 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 IFNA2P01563 188 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 DSCR4P56555 118 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-209ENST00000470026 DMRTC1Q5HYR2 192 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 TMEM268Q5VZI3 342 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 OPN5Q6U736 354 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 SAP25Q8TEE9 199 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 UQCC1Q9NVA1 299 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 HSF4Q9ULV5 492 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 CRYM-AS1A6NIL9 109 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 ZNF705EA8MWA4 302 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-209ENST00000470026 GAPDHP04406 335 aaKnown RBP11.92□□□□□ -0.5
BRCA1-209ENST00000470026 CAV2P51636 162 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 MRPS34P82930 218 aaKnown RBP11.92□□□□□ -0.5
BRCA1-209ENST00000470026 FAM27BQ5VT28 67 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 EIF5AL1Q6IS14 154 aaKnown RBP11.92□□□□□ -0.5
BRCA1-209ENST00000470026 RPUSD3Q6P087 351 aaKnown RBP11.92□□□□□ -0.5
BRCA1-209ENST00000470026 ASCL4Q6XD76 172 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 C20orf196Q8IYI0 205 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 SEMA6DQ8NFY4 1073 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 SPSB1Q96BD6 273 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 SGK3Q96BR1 496 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 NAA11Q9BSU3 229 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-209ENST00000470026 ZNF700Q9H0M5 742 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 HPF1Q9NWY4 346 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 OCIAD1Q9NX40 245 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 F8W036 122 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 CELA2AP08217 269 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 HOXB5P09067 269 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 SULT1A2P50226 295 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 KRTAP27-1Q3LI81 207 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 IQCF2Q8IXL9 164 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 MAML2Q8IZL2 1156 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-209ENST00000470026 SPAG16Q8N0X2 631 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 PIGTQ969N2 578 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 SPTSSAQ969W0 71 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 FBXO17Q96EF6 278 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 UCN2Q96RP3 112 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 S100A13Q99584 98 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 NRIP2Q9BQI9 281 aa11.92□□□□□ -0.5
BRCA1-209ENST00000470026 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 MED12Q93074 2177 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 NPIPA2E9PIF3 369 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 NPIPA3F8WFD2 350 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 TERTO14746 1132 aaKnown RBP11.91□□□□□ -0.5
BRCA1-209ENST00000470026 DEDDO75618 318 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 SNAPINO95295 136 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 CST4P01036 141 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 HEXAP06865 529 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 UMODP07911 640 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 DBHP09172 617 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 CCL3P10147 92 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 COX6A1P12074 109 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 RBMXP38159 391 aaKnown RBP11.91□□□□□ -0.5
BRCA1-209ENST00000470026 EXT1Q16394 746 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 SNAI3Q3KNW1 292 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 RPL7L1Q6DKI1 246 aaKnown RBP11.91□□□□□ -0.5
BRCA1-209ENST00000470026 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 BTNL8Q6UX41 500 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 PLXDC2Q6UX71 529 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 TMEM200AQ86VY9 491 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 LRRC18Q8N456 261 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 LYPD6BQ8NI32 183 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-209ENST00000470026 RCC2Q9P258 522 aaKnown RBP11.91□□□□□ -0.5
BRCA1-209ENST00000470026 ANXA10Q9UJ72 324 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 MYO7BQ6PIF6 2116 aa11.91□□□□□ -0.5
BRCA1-209ENST00000470026 LAMA1P25391 3075 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 DNPH1O43598 174 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 KNG1P01042 644 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 SERPINA5P05154 406 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 CD5P06127 495 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 DTYMKP23919 212 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 ACKR3P25106 362 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 CXCL12P48061 93 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 IL11RAQ14626 422 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 IAH1Q2TAA2 248 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 DHRS11Q6UWP2 260 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 LINC00518Q8N0U6 118 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 M1APQ8TC57 530 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms