RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MEMO1Q9Y316 297 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 DSPP15924 2871 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 PQLC2LA1A4F0 135 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 H7C417 338 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 LILRA1O75019 489 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 HTR3BO95264 441 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 CSTBP04080 98 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 SELEP16581 610 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 GPM6AP51674 278 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 RPS27AP62979 156 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 PDZK1IP1Q13113 114 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 DYRK1AQ13627 763 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 CDNFQ49AH0 187 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 C1QTNF12Q5T7M4 302 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 OR56B1Q8NGI3 324 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 OR5A2Q8NGI9 324 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 ZC3HAV1LQ96H79 300 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 C7orf50Q9BRJ6 194 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 NUDT16L1Q9BRJ7 211 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 BCL2L14Q9BZR8 327 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 SELENOIQ9C0D9 397 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 MTFP1Q9UDX5 166 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 C16orf97H3BN30 126 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 SULT1C2O00338 296 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 PFDN1O60925 122 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 TUBG1P23258 451 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 CA7P43166 264 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 NAAAQ02083 359 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 SNTB2Q13425 540 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 C3orf36Q3SXR2 165 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 ZNF260Q3ZCT1 412 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 Q6ZTK2 550 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 CELF2-AS1Q8N7Q2 184 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 KLF14Q8TD94 323 aaPredicted RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 HPSE2Q8WWQ2 592 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 DVL3Q92997 716 aaPredicted RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 USB1Q9BQ65 265 aaKnown RBP16.28■□□□□ 0.2
SMC4-209ENST00000468653 MMP28Q9H239 520 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 SCPEP1Q9HB40 452 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 TUBG2Q9NRH3 451 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 JKAMPQ9P055 326 aa16.28■□□□□ 0.2
SMC4-209ENST00000468653 A0A0A6YYD4 124 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 FUOMA2VDF0 154 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 TMEM235A6NFC5 223 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 ZNF732B4DXR9 585 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 SOCS1O15524 211 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 ZNF780AO75290 641 aaPredicted RBP16.27■□□□□ 0.2
SMC4-209ENST00000468653 LPLP06858 475 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 CA6P23280 308 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 CALCRP30988 508 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 BCAP31P51572 246 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 PLET1Q6UQ28 207 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 ASCL4Q6XD76 172 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 PXT1Q8NFP0 134 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 OR51F2Q8NH61 342 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 GPX8Q8TED1 209 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 OR5P3Q8WZ94 311 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 AQP3Q92482 292 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 RAB3CQ96E17 227 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 MARS2Q96GW9 593 aaKnown RBP16.27■□□□□ 0.2
SMC4-209ENST00000468653 NLKQ9UBE8 527 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 OSGIN2Q9Y236 505 aa16.27■□□□□ 0.2
SMC4-209ENST00000468653 ANKRD20A5PA0PJZ0 165 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 MEIS3P1A6NDR6 274 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 ERVH48-1M5A8F1 160 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 GTF2F2P13984 249 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 GNB3P16520 340 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 CALHM1Q8IU99 346 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 C1orf174Q8IYL3 243 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 ZNF611Q8N823 705 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 DUSP18Q8NEJ0 188 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 SEH1LQ96EE3 360 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 FGF23Q9GZV9 251 aaPredicted RBP16.26■□□□□ 0.19
SMC4-209ENST00000468653 PCDHB16Q9NRJ7 776 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 TAS2R8Q9NYW2 309 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 NPAP1Q9NZP6 1156 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 ELF5Q9UKW6 265 aaPredicted RBP16.26■□□□□ 0.19
SMC4-209ENST00000468653 PRR14LQ5THK1 2151 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 WIPF3A6NGB9 483 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 OR5B21A6NL26 309 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 IQCF6A8MYZ5 107 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 CRYAAP02489 173 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 MT-ND4P03905 459 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 CPT2P23786 658 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 SLC6A1P30531 599 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 MPV17P39210 176 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 HAAOP46952 286 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 PSG7Q13046 419 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 PCGF3Q3KNV8 242 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 ZNF718Q3SXZ3 478 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 SLC25A26Q70HW3 274 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 GLCCI1Q86VQ1 547 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 FAM89BQ8N5H3 189 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 ZSCAN4Q8NAM6 433 aaPredicted RBP16.26■□□□□ 0.19
SMC4-209ENST00000468653 OR8S1Q8NH09 359 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 TM2D1Q9BX74 207 aa16.26■□□□□ 0.19
SMC4-209ENST00000468653 IGKV1-12A0A0C4DH73 117 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 CCL21O00585 134 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 IGKV1D-12P01611 117 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 CSF1P09603 554 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 372.3 ms