RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 AVPI1Q5T686 147 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 DCUN1D2Q6PH85 259 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 SLC25A47Q6Q0C1 308 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 LINC00299Q6ZSB3 139 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 DEFB128Q7Z7B8 93 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 FBXO16Q8IX29 292 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-212ENST00000466845 GCSAMQ8N6F7 178 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 KIR3DL3Q8N743 410 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 PACRGLQ8N7B6 248 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 GJC3Q8NFK1 279 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 OR4E2Q8NGC2 313 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 OR52B6Q8NGF0 335 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 GPR119Q8TDV5 335 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 SLC38A5Q8WUX1 472 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 IMP4Q96G21 291 aaKnown RBP4.86□□□□□ -1.63
LRCH3-212ENST00000466845 REEP6Q96HR9 211 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 CNBD2Q96M20 576 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 OR52E6Q96RD3 313 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 ATP5SQ99766 215 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 NKX3-1Q99801 234 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-212ENST00000466845 GINS3Q9BRX5 216 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 SUCNR1Q9BXA5 334 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 RSPO3Q9BXY4 272 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-212ENST00000466845 OR11A1Q9GZK7 315 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 CDCP1Q9H5V8 836 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 FBXO6Q9NRD1 293 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-212ENST00000466845 KCNS2Q9ULS6 477 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 A3GALT2U3KPV4 340 aa4.86□□□□□ -1.63
LRCH3-212ENST00000466845 MYH13Q9UKX3 1938 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 A0A087WX48 190 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 TRAPPC13A5PLN9 417 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 TCP10L2B9ZVM9 353 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 F5H6K3 240 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 VCYO14598 125 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 TAPBPO15533 448 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 MBTPS2O43462 519 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SYT7O43581 403 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SPRY2O43597 315 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 EFNA2O43921 213 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 EIF4E2O60573 245 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 STK16O75716 305 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 MMP23AO75900 390 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SNRPCP09234 159 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 PVALBP20472 110 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 RPL13AP40429 203 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 LEPP41159 167 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SGSHP51688 502 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 CLDN6P56747 220 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 PIGPP57054 158 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 ABCE1P61221 599 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SNRPEP62304 92 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 RHOBP62745 196 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 PAFAH1B2P68402 229 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 BAXQ07812 192 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 RBMS2Q15434 407 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 UPP1Q16831 310 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 TCTN1Q2MV58 587 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 TRMT5Q32P41 509 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SCGB2B2Q4G0G5 96 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 ACSF3Q4G176 576 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 OR4A47Q6IF82 309 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 WDR74Q6RFH5 385 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 ASRGL1Q7L266 308 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 MOB3BQ86TA1 216 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 ZNF547Q8IVP9 402 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 CMTM1Q8IZ96 169 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 IQCF1Q8N6M8 205 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 BMPERQ8N8U9 685 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SLC30A7Q8NEW0 376 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 OR4M1Q8NGD0 313 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 OR4D11Q8NGI4 311 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 OR5K1Q8NHB7 308 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 OSR1Q8TAX0 266 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SMAP2Q8WU79 429 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 EEF1AKMT1Q8WVE0 214 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 BADQ92934 168 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 APOBEC3DQ96AK3 386 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 PIK3IP1Q96FE7 263 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 GRAMD2BQ96HH9 432 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 DNAJC30Q96LL9 226 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 MARVELD1Q9BSK0 173 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 CST9LQ9H4G1 147 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 IKZF5Q9H5V7 419 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SLCO1B3Q9NPD5 702 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 ACP6Q9NPH0 428 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SLC7A10Q9NS82 523 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 RNF186Q9NXI6 227 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SIGLEC8Q9NYZ4 499 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 MED11Q9P086 117 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 ZNF230Q9UIE0 474 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 RCL1Q9Y2P8 373 aaKnown RBP4.85□□□□□ -1.63
LRCH3-212ENST00000466845 SAR1BQ9Y6B6 198 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 MYH10P35580 1976 aa4.85□□□□□ -1.63
LRCH3-212ENST00000466845 KIR2DS5A0A0G2JLQ3 304 aa4.84□□□□□ -1.63
LRCH3-212ENST00000466845 A0A0G2JNG1 304 aa4.84□□□□□ -1.63
LRCH3-212ENST00000466845 SMIM28A0A1B0GU29 152 aa4.84□□□□□ -1.63
LRCH3-212ENST00000466845 KRTAP29-1A8MX34 341 aaPredicted RBP4.84□□□□□ -1.63
LRCH3-212ENST00000466845 CORTO00230 105 aa4.84□□□□□ -1.63
LRCH3-212ENST00000466845 PLPP1O14494 284 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms