RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 OR52N4Q8NGI2 321 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 OR4D10Q8NGI6 311 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 MARCH1Q8TCQ1 289 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SMIM19Q96E16 107 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 LINC00615Q96LM1 132 aaPredicted RBP7.8□□□□□ -1.16
HPS4-209ENST00000466781 CXXC4Q9H2H0 198 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 UCK1Q9HA47 277 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SLC25A19Q9HC21 320 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 B9D1Q9UPM9 204 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 FOXJ3Q9UPW0 622 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 FOCADQ5VW36 1801 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 A0A087WUJ7 227 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 DEFB108AA8MXU0 73 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 FCGR3BO75015 233 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 BRS3P32247 399 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 LIPAP38571 399 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 RPS19P39019 145 aaKnown RBP7.8□□□□□ -1.16
HPS4-209ENST00000466781 PAX5Q02548 391 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SPRED3Q2MJR0 410 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 XKR7Q5GH72 579 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 ANKRD53Q8N9V6 530 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 OR13C5Q8NGS8 318 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 LRRC29Q8WV35 223 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 TEX37Q96LM6 180 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 RASL11BQ9BPW5 248 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 TUBGCP6Q96RT7 1819 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 RFPL4AA6NLU0 287 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 RFPL4AL1F8VTS6 287 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SFTPCP11686 197 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 CA6P23280 308 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 MAVSQ7Z434 540 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 LYG2Q86SG7 212 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 OR1L4Q8NGR5 311 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 RND1Q92730 232 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 PLPPR2Q96GM1 343 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SLC25A32Q9H2D1 315 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 FAM53CQ9NYF3 392 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 PCDHGA9Q9Y5G4 932 aaKnown RBP7.8□□□□□ -1.16
HPS4-209ENST00000466781 GABRA1P14867 456 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 CPN1P15169 458 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 PI3P19957 117 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 OR2T2Q6IF00 324 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 CXorf58Q96LI9 332 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 HSD17B10Q99714 261 aaKnown RBP7.8□□□□□ -1.16
HPS4-209ENST00000466781 POMT1Q9Y6A1 747 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SERPINE3A8MV23 424 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 PPP1CBP62140 327 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 TMEM267Q0VDI3 215 aaPredicted RBP7.8□□□□□ -1.16
HPS4-209ENST00000466781 MYPOPQ86VE0 399 aaPredicted RBP7.8□□□□□ -1.16
HPS4-209ENST00000466781 FAM26EQ8N5C1 309 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 OR1L1Q8NH94 360 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 ADAM11O75078 769 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 SP1P08047 785 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 HOXC4P09017 264 aaPredicted RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 OR4E1P0C645 316 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 OTPQ5XKR4 325 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 UBE3DQ7Z6J8 389 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 BLNKQ8WV28 456 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 PP6455Q8WZ26 134 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 MRGPRX3Q96LB0 322 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 RSRP1Q9BUV0 290 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 ZNF354AO60765 605 aaPredicted RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 LYZL6O75951 148 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 OR52L2PQ8NGH6 319 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 RTN4IP1Q8WWV3 396 aaPredicted RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 NOL4LQ96MY1 436 aaPredicted RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 GABARAPL3Q9BY60 117 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 ZDHHC11Q9H8X9 412 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 KCNJ3P48549 501 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 LYZP61626 148 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 CDK5R1Q15078 307 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 OR2I1PQ8NGU4 316 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 GDF15Q99988 308 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 GPR87Q9BY21 358 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 A0A0A6YYD5 115 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 OR2W5A6NFC9 320 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 ACSM4P0C7M7 580 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 RPS27P42677 84 aaKnown RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 TPPP2P59282 170 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 KRTDAPP60985 99 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 PDZK1IP1Q13113 114 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 FNDC7Q5VTL7 733 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 SPSB1Q96BD6 273 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 TMEM231Q9H6L2 316 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 CYSLTR2Q9NS75 346 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 PSG11Q9UQ72 335 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 LRP12Q9Y561 859 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 KIAA1217Q5T5P2 1943 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 TRAV38-1A0A0B4J264 116 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 TEX50A0A1B0GTY4 177 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 DLL1O00548 723 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 GATCO43716 136 aaKnown RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 TRAPPC2P0DI81 140 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 TRAPPC2BP0DI82 140 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 FUT3P21217 361 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 USF1P22415 310 aaPredicted RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 TNXAQ16473 311 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 FFAR4Q5NUL3 377 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 ACER2Q5QJU3 275 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms