RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FAM172BPA6NC97 362 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 OR14I1A6ND48 311 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 DISC1C4P0D8 188 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 KLK10O43240 276 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 CEACAM4O75871 244 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 ARR3P36575 388 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 OR3A2P47893 321 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 RBP2P50120 134 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 RSU1Q15404 277 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 NKAPLQ5M9Q1 402 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 ATPAF1Q5TC12 328 aaPredicted RBP11.72□□□□□ -0.53
UBE4B-206ENST00000466379 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 MED30Q96HR3 178 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 POM121L2Q96KW2 1035 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 HYLS1Q96M11 299 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 TAAR6Q96RI8 345 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
UBE4B-206ENST00000466379 ATPIF1Q9UII2 106 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 ZNF107Q9UII5 783 aaPredicted RBP11.72□□□□□ -0.53
UBE4B-206ENST00000466379 SCP2D1Q9UJQ7 156 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 STARD10Q9Y365 291 aa11.72□□□□□ -0.53
UBE4B-206ENST00000466379 IGKV1-12A0A0C4DH73 117 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 SS18L1O75177 396 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-206ENST00000466379 SIX6O95475 246 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 IGKV1D-12P01611 117 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 SPINK2P20155 84 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 MEF2DQ14814 521 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 MICBQ29980 383 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 LHFPL2Q6ZUX7 228 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 C6orf201Q7Z4U5 140 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 MDP1Q86V88 176 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 ASCC1Q8N9N2 400 aaKnown RBP11.71□□□□□ -0.53
UBE4B-206ENST00000466379 OR4K15Q8NH41 348 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 BCL2L2Q92843 193 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-206ENST00000466379 FBXW5Q969U6 566 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 GMPPAQ96IJ6 420 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-206ENST00000466379 TM2D1Q9BX74 207 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 METTL9Q9H1A3 318 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 ZNF629Q9UEG4 869 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-206ENST00000466379 KCNN3Q9UGI6 736 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 VSIG4Q9Y279 399 aa11.71□□□□□ -0.53
UBE4B-206ENST00000466379 COX5BP10606 129 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 PLP2Q04941 152 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 TSC22D1Q15714 1073 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 MRPL21Q7Z2W9 205 aaKnown RBP11.71□□□□□ -0.54
UBE4B-206ENST00000466379 SLC7A5P1Q8MH63 180 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 CNEP1R1Q8N9A8 125 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 OR2T35Q8NGX2 323 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.54
UBE4B-206ENST00000466379 ST6GALNAC5Q9BVH7 336 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 PAPOLGQ9BWT3 736 aaKnown RBP11.71□□□□□ -0.54
UBE4B-206ENST00000466379 SLC7A11Q9UPY5 501 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 NPTNQ9Y639 398 aa11.71□□□□□ -0.54
UBE4B-206ENST00000466379 UBE2QL1A1L167 161 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 G3V3Q6 166 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 RGS13O14921 159 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 CSTBP04080 98 aaKnown RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 PDGFAP04085 211 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 CPT2P23786 658 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 WNT5AP41221 380 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 TAF9Q16594 264 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 MYPOPQ86VE0 399 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 Q96M66 194 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 SLC25A21Q9BQT8 299 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 HDHD3Q9BSH5 251 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 FGF23Q9GZV9 251 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 RANBP3Q9H6Z4 567 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 PIPOXQ9P0Z9 390 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 OR2AT4A6NND4 320 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 AQP7O14520 342 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 LYZL6O75951 148 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 OR4E1P0C645 316 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 IGHV1-2P23083 117 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 DNASE1P24855 282 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 FUT6P51993 359 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 FAM189A2Q15884 450 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 PNLIPRP3Q17RR3 467 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 PIGYQ3MUY2 71 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 TFAP2EQ6VUC0 442 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 ZADH2Q8N4Q0 377 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 C9orf106Q8NAJ2 232 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 BHLHE23Q8NDY6 225 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 APOBEC3DQ96AK3 386 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 PRRT1Q99946 306 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 LUZP4Q9P127 313 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 EIF3KQ9UBQ5 218 aaKnown RBP11.7□□□□□ -0.54
UBE4B-206ENST00000466379 ANAPC10Q9UM13 185 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 BOD1L1Q8NFC6 3051 aa11.7□□□□□ -0.54
UBE4B-206ENST00000466379 K7EM74 188 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 GOSR2O14653 212 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 TSC22D2O75157 780 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 SFTPBP07988 381 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 CELA3BP08861 270 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 GSTT2P0CG29 244 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 APLNRP35414 380 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms