RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NRARPQ7Z6K4 114 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 LYPD6Q86Y78 171 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 SKA3Q8IX90 412 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 CCDC36Q8IYA8 594 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 TOMM5Q8N4H5 51 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 ZNF610Q8N9Z0 462 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 OR14K1Q8NGZ2 314 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-215ENST00000465457 AKAP1Q92667 903 aaKnown RBP eCLIP11.9□□□□□ -0.5
HDAC6-215ENST00000465457 NEUROG1Q92886 237 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 ITPKCQ96DU7 683 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 ADAT3Q96EY9 351 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-215ENST00000465457 PLPPR2Q96GM1 343 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 FAM71F1Q96KD3 344 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-215ENST00000465457 TECTBQ96PL2 329 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 ABHD1Q96SE0 405 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 TMEM204Q9BSN7 226 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 C11orf54Q9H0W9 315 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-215ENST00000465457 WNT5BQ9H1J7 359 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 COPZ2Q9P299 210 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 GHRLQ9UBU3 117 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 CLEC4AQ9UMR7 237 aa11.9□□□□□ -0.5
HDAC6-215ENST00000465457 METTL21EPA6NDL7 271 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 PLA2G10O15496 165 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 ZNF93P35789 620 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-215ENST00000465457 TAS2R20P59543 309 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 PLP2Q04941 152 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 RSPO1Q2MKA7 263 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-215ENST00000465457 C2orf76Q3KRA6 126 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 BEX5Q5H9J7 111 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 ZBTB37Q5TC79 503 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 PLET1Q6UQ28 207 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 ZNF554Q86TJ5 538 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 PNLDC1Q8NA58 520 aaKnown RBP11.89□□□□□ -0.51
HDAC6-215ENST00000465457 DUSP18Q8NEJ0 188 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 OR51D1Q8NGF3 324 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 OR13C9Q8NGT0 318 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 YIPF5Q969M3 257 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 NUDT16L1Q9BRJ7 211 aaKnown RBP11.89□□□□□ -0.51
HDAC6-215ENST00000465457 CHST5Q9GZS9 411 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 OPA3Q9H6K4 179 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 RNF121Q9H920 327 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 TAS2R8Q9NYW2 309 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 NPAP1Q9NZP6 1156 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 CDC42EP3Q9UKI2 254 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 RAB22AQ9UL26 194 aa11.89□□□□□ -0.51
HDAC6-215ENST00000465457 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
HDAC6-215ENST00000465457 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 FAM240BA0A1B0GVZ2 78 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 NAP1L6A6NFF2 107 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 GGT3PA6NGU5 568 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 LDLRAD4O15165 306 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 SERPINA5P05154 406 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-215ENST00000465457 CDK2P24941 298 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 GSK3AP49840 483 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 RIPPLY1Q0D2K3 151 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 FAPQ12884 760 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 GFOD2Q3B7J2 385 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 C11orf91Q3C1V1 193 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 PABPC1L2AQ5JQF8 200 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 FAM214BQ7L5A3 538 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 NUFIP2Q7Z417 695 aaKnown RBP11.88□□□□□ -0.51
HDAC6-215ENST00000465457 SEMA6DQ8NFY4 1073 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 OR51A2Q8NGJ7 313 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 CHAC2Q8WUX2 184 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 SPSB1Q96BD6 273 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 ELOVL5Q9NYP7 299 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 N6AMT1Q9Y5N5 214 aa11.88□□□□□ -0.51
HDAC6-215ENST00000465457 PLCE1Q9P212 2302 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 TMEM272A0A1B0GTI8 110 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 J3QW42 95 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 SULT1C2O00338 296 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 LMX1BO60663 402 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 IGHV3-9P01782 118 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 LCATP04180 440 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 CRHP06850 196 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 HCKP08631 526 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 DANCRP0C864 163 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 ZNF16P17020 682 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-215ENST00000465457 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
HDAC6-215ENST00000465457 GUSBP1Q15486 140 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 WFDC8Q8IUA0 241 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 OR5AS1Q8N127 324 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 OR1K1Q8NGR3 316 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 OR6K3Q8NGY3 331 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 AKR7LQ8NHP1 331 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 CREB3L1Q96BA8 519 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 REEP6Q96HR9 211 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 LYZL4Q96KX0 146 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 C1QTNF5Q9BXJ0 243 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 BEX2Q9BXY8 128 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 ATG5Q9H1Y0 275 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 SCPEP1Q9HB40 452 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 CGGBP1Q9UFW8 167 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms