RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CRIP3Q6Q6R5 217 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 GCNT2Q8N0V5 402 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 TMEM104Q8NE00 496 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 OR4C16Q8NGL9 310 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 OR1K1Q8NGR3 316 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 C12orf4Q9NQ89 552 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 NPDC1Q9NQX5 325 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-213ENST00000462730 SESN1Q9Y6P5 492 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 MED12LQ86YW9 2145 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 hCG_38984A0A1B0GV85 526 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 WIPF3A6NGB9 483 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 XRCC2O43543 280 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 CDC14BO60729 498 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 CRTAPO75718 401 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-213ENST00000462730 SCGNO76038 276 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 CCNOP22674 350 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 ARR3P36575 388 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 GSK3AP49840 483 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 ACTBP60709 375 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 TSPAN5P62079 268 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 ACTG1P63261 375 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 UXS1Q8NBZ7 420 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 KCNG3Q8TAE7 436 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 TNFAIP8L1Q8WVP5 186 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 AQP3Q92482 292 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 GSX2Q9BZM3 304 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 LPAR5Q9H1C0 372 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 BANF2Q9H503 90 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 A0A0A6YYD4 124 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 A0A1W2PP11 408 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 OR14I1A6ND48 311 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 ARPC1BO15143 372 aaKnown RBP12.55□□□□□ -0.4
HDAC6-213ENST00000462730 IL18BPO95998 194 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 AKAIN1P0CW23 69 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 COX5BP10606 129 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 PTGFRP43088 359 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 FAM3AP98173 230 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 LINC00303Q3SY05 128 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 CDNFQ49AH0 187 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 ACSF3Q4G176 576 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-213ENST00000462730 SLC22A6Q4U2R8 563 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 HIKESHIQ53FT3 197 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 OR10R2Q8NGX6 335 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 TMEM59Q9BXS4 323 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 GLRX2Q9NS18 164 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 CACNA1GO43497 2377 aa12.55□□□□□ -0.4
HDAC6-213ENST00000462730 C5orf49A4QMS7 147 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CRYABP02511 175 aaKnown RBP12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CCL2P13500 99 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 ZP3P21754 424 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 RAB1AP62820 205 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CNN3Q15417 329 aaKnown RBP12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CLVS2Q5SYC1 327 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 GLDNQ6ZMI3 551 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-213ENST00000462730 C1QL2Q7Z5L3 287 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 SPICQ8N5J4 248 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 OR8S1Q8NH09 359 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 BCL2L2Q92843 193 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-213ENST00000462730 DVL3Q92997 716 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-213ENST00000462730 SEC22CQ9BRL7 303 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CHIAQ9BZP6 476 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 MGAT4CQ9UBM8 478 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 SLC34A2O95436 690 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CD3DP04234 171 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 GNB3P16520 340 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 RAD52P43351 418 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 UCNP55089 124 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 DHODHQ02127 395 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 PLP2Q04941 152 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF585AQ6P3V2 769 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 TFAP2EQ6VUC0 442 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 COLCA1Q6ZS62 124 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 RTN4RL2Q86UN3 420 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 FJX1Q86VR8 437 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 GABRG1Q8N1C3 465 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 OR4D10Q8NGI6 311 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 SPSB4Q96A44 273 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 SPSB1Q96BD6 273 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 NUDT16L1Q9BRJ7 211 aaKnown RBP12.54□□□□□ -0.4
HDAC6-213ENST00000462730 SELENOIQ9C0D9 397 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CST11Q9H112 138 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF71Q9NQZ8 489 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-213ENST00000462730 CA10Q9NS85 328 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 GHRLQ9UBU3 117 aa12.54□□□□□ -0.4
HDAC6-213ENST00000462730 IGF2RP11717 2491 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 PTPRQQ9UMZ3 2332 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 FAM230AA0A1W2PPH8 454 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 NRASP01111 189 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 CHRM2P08172 466 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 ALDH3B1P43353 468 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 MTCP1P56278 107 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 TAS2R19P59542 299 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 CXADRP78310 365 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 OPCMLQ14982 345 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 GUSBP1Q15486 140 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms