RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SNX5Q9Y5X3 404 aa7.35□□□□□ -1.23
LDB1-203ENST00000461873 MDFIC2A0A1B0GVS7 189 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 C5orf63A6NC05 138 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 FAM181BA6NEQ2 426 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 ANKRD61A6NGH8 418 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 OR2AT4A6NND4 320 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 TNFRSF13BO14836 293 aaPredicted RBP7.34□□□□□ -1.23
LDB1-203ENST00000461873 DHRS3O75911 302 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 CYB5AP00167 134 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 NRASP01111 189 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 EGR1P18146 543 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 OMGP23515 440 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 VHLP40337 213 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 HCCSP53701 268 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 RAG2P55895 527 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 LGALS4P56470 323 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 CDC42P60953 191 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 RPL15P61313 204 aaKnown RBP7.34□□□□□ -1.23
LDB1-203ENST00000461873 EGR3Q06889 387 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 ZIK1Q3SY52 487 aaPredicted RBP7.34□□□□□ -1.23
LDB1-203ENST00000461873 CLVS2Q5SYC1 327 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 ZBTB37Q5TC79 503 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 OGFRL1Q5TC84 451 aaPredicted RBP7.34□□□□□ -1.23
LDB1-203ENST00000461873 NXNL2Q5VZ03 156 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 HAGHLQ6PII5 290 aaPredicted RBP7.34□□□□□ -1.23
LDB1-203ENST00000461873 ZNF322Q6U7Q0 402 aaPredicted RBP7.34□□□□□ -1.23
LDB1-203ENST00000461873 ZBTB49Q6ZSB9 765 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 PRSS45Q7RTY3 260 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 FAM185AQ8N0U4 392 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 CBR4Q8N4T8 237 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 FAM216BQ8N7L0 139 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 OR5D13Q8NGL4 314 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 TMEM163Q8TC26 289 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 OR51E1Q8TCB6 317 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 DYRK2Q92630 601 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 EME1Q96AY2 570 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 MRPL48Q96GC5 212 aaKnown RBP7.34□□□□□ -1.23
LDB1-203ENST00000461873 OR8B4Q96RC9 309 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 FAM234AQ9H0X4 552 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 SMURF1Q9HCE7 757 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 GPR84Q9NQS5 396 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 IMPAD1Q9NX62 359 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 RASL12Q9NYN1 266 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
LDB1-203ENST00000461873 H3BUI4 141 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 CASQ2O14958 399 aaPredicted RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 GATBO75879 557 aaKnown RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 RPP14O95059 124 aaKnown RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 NXPH2O95156 264 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 MELTFP08582 738 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 HAAOP46952 286 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 TGM4P49221 684 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 DAPP51397 102 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 HOXA4Q00056 320 aaPredicted RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 ATPAF1Q5TC12 328 aaPredicted RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 DHRS7BQ6IAN0 325 aaPredicted RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 FAHD1Q6P587 224 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 BRICD5Q6PL45 260 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 KIR3DL3Q8N743 410 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 DTX3Q8N9I9 347 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 ZSCAN4Q8NAM6 433 aaPredicted RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 OR10H4Q8NGA5 316 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 OR51G2Q8NGK0 314 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 IL4I1Q96RQ9 567 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 TBX15Q96SF7 602 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 DCTN5Q9BTE1 182 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 SLITRK2Q9H156 845 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 TLNRD1Q9H1K6 362 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 RIBC2Q9H4K1 309 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 METTL8Q9H825 291 aaKnown RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 NEK6Q9HC98 313 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 SIRT7Q9NRC8 400 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 CLN6Q9NWW5 311 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 ZNF319Q9P2F9 582 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 WARS2Q9UGM6 360 aaKnown RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 GLS2Q9UI32 602 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 OR52A1Q9UKL2 312 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 SF3B6Q9Y3B4 125 aaKnown RBP7.33□□□□□ -1.24
LDB1-203ENST00000461873 R4GMQ9 66 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 ANK2Q01484 3957 aa7.33□□□□□ -1.24
LDB1-203ENST00000461873 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 A0A1W2PRD5 423 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 A0A1W2PRF3 423 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 A0A1W2PRM7 423 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 MEIOCA2RUB1 952 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 M0R1W7 72 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 DLGAP1O14490 977 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 EI24O14681 340 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 TIMM23O14925 209 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 SIGLEC5O15389 551 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 SYT7O43581 403 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 PRKYO43930 277 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 MITFO75030 526 aaPredicted RBP7.32□□□□□ -1.24
LDB1-203ENST00000461873 ACAA1P09110 424 aaPredicted RBP7.32□□□□□ -1.24
LDB1-203ENST00000461873 OR2T7P0C7T2 308 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 FAHP16930 419 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 MDKP21741 143 aaPredicted RBP7.32□□□□□ -1.24
LDB1-203ENST00000461873 SLC2A5P22732 501 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 ACKR3P25106 362 aa7.32□□□□□ -1.24
LDB1-203ENST00000461873 AQP4P55087 323 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms