RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	MRPS18B	Q9Y676	258 aa	Known RBP	3.13	□□□□□ -1.91
UBA3-204	ENST00000461522	WDR87	Q6ZQQ6	2873 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	KMT2E	Q8IZD2	1858 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	IQCM	A0A1B0GVH7	501 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TLCD2	A6NGC4	264 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	FRG2C	A6NGY1	282 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522		H3BNH8	94 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522		M0QXV9	152 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TXNDC9	O14530	226 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	COPE	O14579	308 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PLIN3	O60664	434 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	SHOX2	O60902	331 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	MED6	O75586	246 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	STK16	O75716	305 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	ACTL6A	O96019	429 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	IFNA16	P05015	189 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	CRH	P06850	196 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TAC1	P20366	129 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	IMPDH1	P20839	514 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	HTR2C	P28335	458 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PRDX3	P30048	256 aa	Known RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	CALCR	P30988	508 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	GPR183	P32249	361 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	GSS	P48637	474 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PRKX	P51817	358 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	LSM6	P62312	80 aa	Known RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	ZNF45	Q02386	682 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	AQP6	Q13520	282 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	C1orf61	Q13536	156 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	EXOSC2	Q13868	293 aa	Known RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	GK3P	Q14409	553 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	OR4D1	Q15615	310 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TNXA	Q16473	311 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	KCTD19	Q17RG1	926 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	LRRC36	Q1X8D7	754 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	DEFB133	Q30KQ1	61 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PRR30	Q53SZ7	412 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	HIST2H2AA3	Q6FI13	130 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	FAM166A	Q6J272	317 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	CAPN13	Q6MZZ7	669 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	AGTRAP	Q6RW13	159 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	NPSR1	Q6W5P4	371 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TMPRSS11A	Q6ZMR5	421 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	H2BFWT	Q7Z2G1	175 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	RANBP3L	Q86VV4	465 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	OOSP2	Q86WS3	158 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TMEM17	Q86X19	198 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	CCDC71	Q8IV32	467 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	CPNE9	Q8IYJ1	553 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PGAM4	Q8N0Y7	254 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PARP8	Q8N3A8	854 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	LRRC75A	Q8NAA5	344 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	B3GNT7	Q8NFL0	401 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	OR2A1	Q8NGT9	310 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	WDR36	Q8NI36	951 aa	Known RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	FLVCR1-AS1	Q8TAF5	88 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PIGX	Q8TBF5	258 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	LGALS14	Q8TCE9	139 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	RASSF5	Q8WWW0	418 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TCEAL3	Q969E4	200 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	UBE2E3	Q969T4	207 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TMEM45B	Q96B21	275 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PPWD1	Q96BP3	646 aa	Known RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	RAB39B	Q96DA2	213 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	L3HYPDH	Q96EM0	354 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	SGTB	Q96EQ0	304 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	ZIM3	Q96PE6	472 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TNFRSF13C	Q96RJ3	184 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	NIPSNAP1	Q9BPW8	284 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	DDA1	Q9BW61	102 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TMBIM4	Q9HC24	238 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PLEKHJ1	Q9NW61	149 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	HRASLS2	Q9NWW9	162 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	BABAM2	Q9NXR7	383 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	TMEM9	Q9P0T7	183 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	B4GALT7	Q9UBV7	327 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	KIF25	Q9UIL4	384 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	NUP50	Q9UKX7	468 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	POMT2	Q9UKY4	750 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	ZNF490	Q9ULM2	529 aa	Predicted RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	DIMT1	Q9UNQ2	313 aa	Known RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	VSIG4	Q9Y279	399 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	BTRC	Q9Y297	605 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	GSTK1	Q9Y2Q3	226 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	ARL2BP	Q9Y2Y0	163 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	ZNF337	Q9Y3M9	751 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	FRYL	O94915	3013 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	THADA	Q6YHU6	1953 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	MYO15A	Q9UKN7	3530 aa		3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	ASCC3	Q8N3C0	2202 aa	Known RBP	3.12	□□□□□ -1.91
UBA3-204	ENST00000461522	PCDH15	Q96QU1	1955 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522	ATRX	P46100	2492 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522	PPIAL4C	A0A0B4J2A2	164 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522	TRBV7-9	A0A0J9YWB2	115 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522	hCG_38984	A0A1B0GV85	526 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522		A0A1W2PPV9	198 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522		A0A1W2PRD5	423 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522	PSMB11	A5LHX3	300 aa		3.11	□□□□□ -1.91
UBA3-204	ENST00000461522	RNF222	A6NCQ9	220 aa		3.11	□□□□□ -1.91

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