RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CYGBQ8WWM9 190 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 C12orf43Q96C57 262 aaKnown RBP12.78□□□□□ -0.36
VARS-219ENST00000461328 LGALS12Q96DT0 336 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 MYCBPQ99417 103 aaPredicted RBP12.78□□□□□ -0.36
VARS-219ENST00000461328 MS4A7Q9GZW8 240 aaPredicted RBP12.78□□□□□ -0.36
VARS-219ENST00000461328 WDR13Q9H1Z4 485 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 OR51I2Q9H344 312 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 AMBNQ9NP70 447 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 IGHV3OR16-10A0A075B7F0 116 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 TRAV40A0A0B4J280 105 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ANKRD61A6NGH8 418 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 J3QLW9 94 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 RHBDL1O75783 438 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 FADS2O95864 444 aaKnown RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 HTR1AP08908 422 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ZNF19P17023 458 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 CCL1P22362 96 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 PEX2P28328 305 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 OR12D2P58182 307 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ELF3P78545 371 aaPredicted RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 CDONQ4KMG0 1287 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 FAM76BQ5HYJ3 339 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 LPCAT4Q643R3 524 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 KRT74Q7RTS7 529 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 KCTD20Q7Z5Y7 419 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ZNF573Q86YE8 665 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 PRSS35Q8N3Z0 413 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ZDHHC22Q8N966 263 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 RHOXF1Q8NHV9 184 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 TRMT10AQ8TBZ6 339 aaKnown RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 NPRL2Q8WTW4 380 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 GCDHQ92947 438 aaPredicted RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 TMIGD2Q96BF3 282 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 UPRTQ96BW1 309 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 C4orf36Q96KX1 117 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ALG8Q9BVK2 526 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 ESM1Q9NQ30 184 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 C8orf4Q9NR00 106 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 NLKQ9UBE8 527 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 SLC7A11Q9UPY5 501 aa12.77□□□□□ -0.37
VARS-219ENST00000461328 EXOGQ9Y2C4 368 aaKnown RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 RPL36Q9Y3U8 105 aaKnown RBP12.77□□□□□ -0.37
VARS-219ENST00000461328 A0A1B0GW55 424 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 J3QT63 122 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 TNFRSF13BO14836 293 aaPredicted RBP12.76□□□□□ -0.37
VARS-219ENST00000461328 NDUFB3O43676 98 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 GATBO75879 557 aaKnown RBP12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4L2P0CJ85 424 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4L3P0CJ86 424 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4L4P0CJ87 422 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4L5P0CJ88 424 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4L6P0CJ89 424 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4L7P0CJ90 424 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 IGHV4-38-2P0DP08 117 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 HAAOP46952 286 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 FGF12P61328 243 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 ISL1P61371 349 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 LRRC10Q5BKY1 277 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 TMEM42Q69YG0 159 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 STUMQ69YW2 141 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4L9Q6RFH8 374 aaPredicted RBP12.76□□□□□ -0.37
VARS-219ENST00000461328 BTN2A1Q7KYR7 527 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 BCL6BQ8N143 479 aaPredicted RBP12.76□□□□□ -0.37
VARS-219ENST00000461328 OR2G2Q8NGZ5 317 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 AQP3Q92482 292 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DACT3Q96B18 629 aaPredicted RBP12.76□□□□□ -0.37
VARS-219ENST00000461328 PCGF1Q9BSM1 259 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 DUX4Q9UBX2 424 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 POLDIP2Q9Y2S7 368 aa12.76□□□□□ -0.37
VARS-219ENST00000461328 FAM230AA0A1W2PPH8 454 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 OR2AT4A6NND4 320 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 J3QRE1 110 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 ECDO95905 644 aaPredicted RBP12.75□□□□□ -0.37
VARS-219ENST00000461328 SERPINA3P01011 423 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 ZNF20P17024 532 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 GABRA2P47869 451 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 UBA52P62987 128 aaKnown RBP12.75□□□□□ -0.37
VARS-219ENST00000461328 RAB40BQ12829 278 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 GALEQ14376 348 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 TMEM244Q5VVB8 128 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 METTL11BQ5VVY1 283 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 LHFPL3Q86UP9 236 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 RDH10Q8IZV5 341 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 PACRGLQ8N7B6 248 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 H1FXQ92522 213 aaKnown RBP12.75□□□□□ -0.37
VARS-219ENST00000461328 INPP5EQ9NRR6 644 aa12.75□□□□□ -0.37
VARS-219ENST00000461328 PQLC2LA1A4F0 135 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 TMEM89A2RUT3 159 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 SYNGR1O43759 233 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 CLIC3O95833 236 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 TFF1P04155 84 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 LIPFP07098 398 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 OCM2P0CE71 109 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 OCMP0CE72 109 aaPredicted RBP12.74□□□□□ -0.37
VARS-219ENST00000461328 SELLP14151 372 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms