RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 REG3AQ06141 175 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 C2orf80Q0P641 193 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 KIAA0087Q14695 138 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 GPNMBQ14956 572 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 MAD2L1BPQ15013 274 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 TAL2Q16559 108 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 NRF1Q16656 503 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 C5orf47Q569G3 176 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TCTEX1D4Q5JR98 221 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 C6orf52Q5T4I8 152 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 UBE2UQ5VVX9 321 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 THOC7Q6I9Y2 204 aaKnown RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 RWDD4Q6NW29 188 aaKnown RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 FAHD1Q6P587 224 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 MBOAT2Q6ZWT7 520 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CRLF3Q8IUI8 442 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CDKL3Q8IVW4 592 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 C12orf56Q8IXR9 622 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 DEFB107AQ8IZN7 70 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TMEM61Q8N0U2 210 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 OR5AR1Q8NGP9 310 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 OR51E1Q8TCB6 317 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 FAM151AQ8WW52 585 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 DCUN1D4Q92564 292 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 MARC2Q969Z3 335 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ZNF514Q96K75 400 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 ZNF75AQ96N20 296 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 RILPQ96NA2 401 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 P2RX4Q99571 388 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 AGMATQ9BSE5 352 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 BEX2Q9BXY8 128 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 PSTPIP2Q9H939 334 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CCL28Q9NRJ3 127 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SHPKQ9UHJ6 478 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ST3GAL6Q9Y274 331 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SMAD5-AS1Q9Y6J3 95 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 PHF3Q92576 2039 aaKnown RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 ANK1P16157 1881 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ZFC3H1O60293 1989 aaKnown RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 HCFC1P51610 2035 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ZNF831Q5JPB2 1677 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TRAV8-7A0A075B6U6 113 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 hCG_1818297A0A087WSY0 165 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 FAM166BA8MTA8 275 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SEC14L6B5MCN3 397 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TRIM49D1C9J1S8 452 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 F8VP50 259 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 MKRN2OSH3BPM6 223 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SMLR1H3BR10 107 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TMX2-CTNND1H3BSU7 103 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ALOX12BO75342 701 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TRAPPC6AO75865 159 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 UTS2O95399 124 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 LDOC1O95751 146 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 C1QAP02745 245 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 BPGMP07738 259 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CSF3P09919 207 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 GABRG2P18507 467 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 PGAM1P18669 254 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 GGT1P19440 569 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TEAD1P28347 426 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 PRLHRP49683 370 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 FABP6P51161 128 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 RND2P52198 227 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 PRPS1P60891 318 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SEMG2Q02383 582 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TFDP2Q14188 446 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 FZD2Q14332 565 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 EOGTQ5NDL2 527 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 NANOGP8Q6NSW7 305 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 NIPAL1Q6NVV3 410 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ZFP1Q6P2D0 407 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ZCCHC23Q6ZST2 131 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SETD3Q86TU7 594 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 PLCZ1Q86YW0 608 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CPNE9Q8IYJ1 553 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 DAW1Q8N136 415 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 LYG1Q8N1E2 194 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 PNKDQ8N490 385 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CD177Q8N6Q3 437 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 OR4F15Q8NGB8 312 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 OR6K2Q8NGY2 324 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 OR51A7Q8NH64 312 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 C7orf33Q8WU49 177 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 UCN3Q969E3 161 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 BORCS5Q969J3 196 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 C12orf43Q96C57 262 aaKnown RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 ISOC1Q96CN7 298 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CGREF1Q99674 301 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CTRCQ99895 268 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 UQCC2Q9BRT2 126 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TIMM29Q9BSF4 260 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SHCBP1LQ9BZQ2 653 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TMEM9BQ9NQ34 198 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 XPNPEP1Q9NQW7 623 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 ZNF107Q9UII5 783 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 CLEC4EQ9ULY5 219 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 COQ4Q9Y3A0 265 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 RNF11Q9Y3C5 154 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms