RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 PPP1R3EQ9H7J1 279 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 TMEM138Q9NPI0 162 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 C1orf123Q9NWV4 160 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 POLDIP2Q9Y2S7 368 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 MEGF11A6BM72 1044 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 J3QT63 122 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 ARL6IP5O75915 188 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 RGS9O75916 674 aaPredicted RBP12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 MPZP25189 248 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 AZGP1P25311 298 aaKnown RBP12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 TGFBR2P37173 567 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 PMELP40967 661 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 NR4A2P43354 598 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 GPR6P46095 362 aaPredicted RBP12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 MTCP1P56278 107 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 NEDD8Q15843 81 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 SSX1Q16384 188 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 CEACAM19Q7Z692 300 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 CDH26Q8IXH8 852 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 SCCPDHQ8NBX0 429 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 OR13C5Q8NGS8 318 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 UFSP2Q9NUQ7 469 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 ITGB1BP2Q9UKP3 347 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 NPTNQ9Y639 398 aa12.06□□□□□ -0.48
HMGXB4-204ENST00000455359 OTOGQ6ZRI0 2925 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 TRDV1A0A1B0GX56 115 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 FAM230AA0A1W2PPH8 454 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 CYSRT1A8MQ03 144 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 LYNX1G3V0Z9 82 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 CDIPTO14735 213 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 PPIHO43447 177 aaKnown RBP12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 NOS1APO75052 506 aaPredicted RBP12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 LHBP01229 141 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 UCHL1P09936 223 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 LYNX1P0DP58 116 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 BDKRB2P30411 391 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 HAAOP46952 286 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 RPS25P62851 125 aaKnown RBP12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 IL24Q13007 206 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 KCNJ8Q15842 424 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 ASPHD2Q6ICH7 369 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 WDR82Q6UXN9 313 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 AQP3Q92482 292 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 TMEM203Q969S6 136 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 Q96MF0 132 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 MRPS26Q9BYN8 205 aaKnown RBP12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 NOX4Q9NPH5 578 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 RASL12Q9NYN1 266 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 TAS2R4Q9NYW5 299 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 CACNG2Q9Y698 323 aa12.05□□□□□ -0.48
HMGXB4-204ENST00000455359 ITPR3Q14573 2671 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 PRRC2AP48634 2157 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 IGHV4-30-2A0A087WSY4 118 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 hCG_1807616A0A1W2PRN6 198 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 PIN1P1O15428 100 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 MDH2P40926 338 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 GP2P55259 537 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 BTG1P62324 171 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 TMEM155Q4W5P6 130 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 HSD17B12Q53GQ0 312 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 HAGHLQ6PII5 290 aaPredicted RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 TMEM91Q6ZNR0 172 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 SAXO1Q8IYX7 474 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 MUC20Q8N307 709 aaPredicted RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 NKAIN3Q8N8D7 197 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 ZSCAN4Q8NAM6 433 aaPredicted RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 ZNF420Q8TAQ5 688 aaPredicted RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 TRMT10AQ8TBZ6 339 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 RPL3LQ92901 407 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 C12orf43Q96C57 262 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 RHOFQ9HBH0 211 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 TCF7L1Q9HCS4 588 aa12.04□□□□□ -0.48
HMGXB4-204ENST00000455359 PPIAL4EA0A075B759 164 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 IGHV3-64DA0A0J9YX35 117 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 SRRM5B3KS81 715 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 PPIAL4DF5H284 164 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 LGALS8O00214 317 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 NDUFA2O43678 99 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 CYB5AP00167 134 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 HCKP08631 526 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 SMIM18P0DKX4 95 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 PPIAL4FP0DN26 164 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 SRMP19623 302 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 USF1P22415 310 aaPredicted RBP12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 FGF9P31371 208 aaPredicted RBP12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 RANBP1P43487 201 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 FABP5Q01469 135 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 LOXL1Q08397 574 aaPredicted RBP12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 KISS1Q15726 138 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 TIMM50Q3ZCQ8 353 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 GDPGP1Q6ZNW5 385 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 LRRC28Q86X40 367 aaPredicted RBP12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 FAM90A1Q86YD7 464 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 TGIF2LYQ8IUE0 185 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms