RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 IMMP1LQ96LU5 166 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 METTL9Q9H1A3 318 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 TREM1Q9NP99 234 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 B4GALT7Q9UBV7 327 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SPTAN1Q13813 2472 aaKnown RBP10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SHANK1Q9Y566 2161 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 RAD51DO75771 328 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 DHRS3O75911 302 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 IGHMP01871 453 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 ISG15P05161 165 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 CPN1P15169 458 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 CPT2P23786 658 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 AGTR1P30556 359 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SMCO1Q147U7 214 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 P4HA3Q7Z4N8 544 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 OR2V1Q8NHB1 315 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 TMED6Q8WW62 240 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 TMEM231Q9H6L2 316 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 BOKQ9UMX3 212 aaPredicted RBP10.5□□□□□ -0.73
SMPD4-213ENST00000454468 PLSCR5A0PG75 271 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 NRASP01111 189 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 FSTP19883 344 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 CEBPGP53567 150 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ARG2P78540 354 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 MC2RQ01718 297 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 PIGYQ3MUY2 71 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 PDSS1Q5T2R2 415 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 MRPL21Q7Z2W9 205 aaKnown RBP10.49□□□□□ -0.73
SMPD4-213ENST00000454468 SUMF1Q8NBK3 374 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 OR5L1Q8NGL2 311 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 SLC17A5Q9NRA2 495 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF581Q9P0T4 197 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 IL17BQ9UHF5 180 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 IGKV1-9A0A0C4DH69 117 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 SULT1C2O00338 296 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF16P17020 682 aaPredicted RBP10.49□□□□□ -0.73
SMPD4-213ENST00000454468 POLR2GP62487 172 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ZXDAP98168 799 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 FGL1Q08830 312 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ECH1Q13011 328 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 PABPC1L2AQ5JQF8 200 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 C1orf100Q5SVJ3 147 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 SLC23A3Q6PIS1 610 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 GCNT2Q8N0V5 402 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 OR1F12Q8NHA8 337 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 IL1F10Q8WWZ1 152 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 GPHA2Q96T91 129 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 MOB1AQ9H8S9 216 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 WDR54Q9H977 334 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 FOXJ2Q9P0K8 574 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF175Q9Y473 711 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 LNP1A1A4G5 178 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 YKT6O15498 198 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 APOC1P02654 83 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 RAC3P60763 192 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ARF1P84077 181 aaKnown RBP10.49□□□□□ -0.73
SMPD4-213ENST00000454468 PPP1R32Q7Z5V6 425 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 TUSC5Q8IXB3 177 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 RPS4Y2Q8TD47 263 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ANGPTL4Q9BY76 406 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 HRH4Q9H3N8 390 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 HEXA-AS1Q9H8Q6 139 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 DEPPQ9NTK1 212 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 SEMA5BQ9P283 1151 aa10.49□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF629Q9UEG4 869 aaPredicted RBP10.49□□□□□ -0.73
SMPD4-213ENST00000454468 MPTX1A8MV57 137 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 TRIM77I1YAP6 450 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 TNFSF12O43508 249 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 IFNA21P01568 189 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 RBP2P50120 134 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 CCL11P51671 97 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 TMEM50BP56557 158 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 PLP2Q04941 152 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 OR1C1Q15619 314 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 IAH1Q2TAA2 248 aaPredicted RBP10.48□□□□□ -0.73
SMPD4-213ENST00000454468 FIP1L1Q6UN15 594 aaKnown RBP10.48□□□□□ -0.73
SMPD4-213ENST00000454468 SGK3Q96BR1 496 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 LINC00052Q96N35 136 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 ST3GAL6Q9Y274 331 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 FRYQ5TBA9 3013 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 A0A1W2PNV4 684 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 hCG_1807616A0A1W2PRN6 198 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 MED19A0JLT2 244 aaPredicted RBP10.48□□□□□ -0.73
SMPD4-213ENST00000454468 PINLYPA6NC86 204 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF705EA8MWA4 302 aaPredicted RBP10.48□□□□□ -0.73
SMPD4-213ENST00000454468 LINC01387J3KSC0 135 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 DIRAS3O95661 229 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 ADH6P28332 368 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 HERV-K104P61576 105 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 SPEM2Q0P670 501 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 ENDOGQ14249 297 aaKnown RBP10.48□□□□□ -0.73
SMPD4-213ENST00000454468 IGFBP7Q16270 282 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 WDR5BQ86VZ2 330 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 OR10Z1Q8NGY1 313 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 OR14K1Q8NGZ2 314 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 PKDREJQ9NTG1 2253 aa10.48□□□□□ -0.73
SMPD4-213ENST00000454468 A0A087WZY1 265 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 A0A0A6YYD4 124 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 GEMIN2O14893 280 aaKnown RBP10.47□□□□□ -0.73
SMPD4-213ENST00000454468 S100A9P06702 114 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms