RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 STEAP2Q8NFT2 490 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 TMEM45BQ96B21 275 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 RYDENQ9NUL5 291 aaKnown RBP10.23□□□□□ -0.77
VTA1-203ENST00000452973 B3GNT2Q9NY97 397 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 OPN4Q9UHM6 478 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 MGAQ8IWI9 3026 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 CACNA1GO43497 2377 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 MFNGO00587 321 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 SERPINA5P05154 406 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 CD34P28906 385 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 SNU13P55769 128 aaKnown RBP10.22□□□□□ -0.77
VTA1-203ENST00000452973 RAB1AP62820 205 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 IL13RA1P78552 427 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 SORDQ00796 357 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 HIKESHIQ53FT3 197 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 TEX261Q6UWH6 196 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 GCNT2Q8N0V5 402 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 FAM109AQ8N4B1 249 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 ZFP62Q8NB50 900 aaPredicted RBP10.22□□□□□ -0.77
VTA1-203ENST00000452973 PDCD10Q9BUL8 212 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 PECRQ9BY49 303 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 SPRR3Q9UBC9 169 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 U3KQ87 197 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 ZNF850A8MQ14 1090 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 L7N2F9 121 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 M0R233 179 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 OR2A4O95047 310 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 MPC2O95563 127 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 TPOP07202 933 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 CXCL2P19875 107 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 CPT2P23786 658 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 RRADP55042 308 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 CNN3Q15417 329 aaKnown RBP10.22□□□□□ -0.77
VTA1-203ENST00000452973 CLVS2Q5SYC1 327 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 ZNF680Q8NEM1 530 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 OR2A7Q96R45 310 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 FAAP24Q9BTP7 215 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 PTTG3PQ9NZH4 202 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 FAM221AA4D161 298 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 ERVH48-1M5A8F1 160 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 NFYAP23511 347 aaPredicted RBP10.22□□□□□ -0.77
VTA1-203ENST00000452973 SOX8P57073 446 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 PIGYQ3MUY2 71 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 ZBTB37Q5TC79 503 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 TMEM178AQ8NBL3 297 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 DYRK2Q92630 601 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 ARPC5LQ9BPX5 153 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 PAPOLGQ9BWT3 736 aaKnown RBP10.22□□□□□ -0.77
VTA1-203ENST00000452973 METTL9Q9H1A3 318 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 FN3KRPQ9HA64 309 aa10.22□□□□□ -0.77
VTA1-203ENST00000452973 ZNF629Q9UEG4 869 aaPredicted RBP10.22□□□□□ -0.77
VTA1-203ENST00000452973 ZNF107Q9UII5 783 aaPredicted RBP10.22□□□□□ -0.77
VTA1-203ENST00000452973 MUC6Q6W4X9 2439 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 hCG_38984A0A1B0GV85 526 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 A0A1W2PR80 420 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 ZNF205O95201 554 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 CFDP00746 253 aaPredicted RBP10.21□□□□□ -0.77
VTA1-203ENST00000452973 NGFP01138 241 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 ZNF767PQ75MW2 155 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 ST8SIA4Q92187 359 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 SPSB1Q96BD6 273 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 ALX4Q9H161 411 aaPredicted RBP10.21□□□□□ -0.77
VTA1-203ENST00000452973 HEXA-AS1Q9H8Q6 139 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 PRR13Q9NZ81 148 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 EHFQ9NZC4 300 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 GHRLQ9UBU3 117 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 GPR160Q9UJ42 338 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 SLC7A11Q9UPY5 501 aa10.21□□□□□ -0.77
VTA1-203ENST00000452973 HOXD11P31277 338 aaPredicted RBP10.21□□□□□ -0.78
VTA1-203ENST00000452973 ATXN7L3Q14CW9 347 aaPredicted RBP10.21□□□□□ -0.78
VTA1-203ENST00000452973 FAM189A2Q15884 450 aa10.21□□□□□ -0.78
VTA1-203ENST00000452973 GLRX5Q86SX6 157 aa10.21□□□□□ -0.78
VTA1-203ENST00000452973 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.78
VTA1-203ENST00000452973 C10orf35Q96D05 121 aa10.21□□□□□ -0.78
VTA1-203ENST00000452973 SLC22A20A6NK97 555 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 CDRT15L2A8MXV6 281 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 H3BUI4 141 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 PRKACBP22694 351 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 OPRM1P35372 400 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 TNFSF10P50591 281 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 CAMK2BQ13554 666 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 OR56B2PQ8NGI1 322 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 OR51F2Q8NH61 342 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 TERB2Q8NHR7 220 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 BCO1Q9HAY6 547 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 ASCL3Q9NQ33 180 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 SPENQ96T58 3664 aaKnown RBP10.2□□□□□ -0.78
VTA1-203ENST00000452973 IGKV1D-8A0A087WSZ0 117 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 IGKV1-12A0A0C4DH73 117 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 PLSCR5A0PG75 271 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 GEMIN2O14893 280 aaKnown RBP10.2□□□□□ -0.78
VTA1-203ENST00000452973 RGS11O94810 467 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 IGKV1D-12P01611 117 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 SFTPBP07988 381 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 EXOSC2Q13868 293 aaKnown RBP10.2□□□□□ -0.78
VTA1-203ENST00000452973 GK2Q14410 553 aaPredicted RBP10.2□□□□□ -0.78
VTA1-203ENST00000452973 OPCMLQ14982 345 aa10.2□□□□□ -0.78
VTA1-203ENST00000452973 RNPS1Q15287 305 aaKnown RBP10.2□□□□□ -0.78
VTA1-203ENST00000452973 DEFB109BQ30KR1 87 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms