RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PINX1Q96BK5 328 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SORT1Q99523 831 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CHCHD6Q9BRQ6 235 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF665Q9H7R5 613 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 DCAF13Q9NV06 445 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 NTNG1Q9Y2I2 539 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 UBE2J1Q9Y385 318 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 FLVCR1Q9Y5Y0 555 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SHANK1Q9Y566 2161 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PPIAL4CA0A0B4J2A2 164 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 ST8SIA5O15466 376 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PHF1O43189 567 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MITFO75030 526 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SCO1O75880 301 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PPIAL4GP0DN37 164 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 AMY2BP19961 511 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 IGLV3-21P80748 117 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF674Q2M3X9 581 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 LRRC56Q8IYG6 542 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 ENTHD1Q8IYW4 607 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MDS2Q8NDY4 140 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR2AK2Q8NG84 335 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 TAAR8Q969N4 342 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MCHR2Q969V1 340 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 FAM53CQ9NYF3 392 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 GDF2Q9UK05 429 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 KCNE3Q9Y6H6 103 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 IGHV3OR15-7A0A075B7D8 119 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SMIM10L1P0DMW3 83 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PVALBP20472 110 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CDAP32320 146 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPR12P47775 334 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 IL13RA1P78552 427 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CATR1Q13166 79 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 TPBGQ13641 420 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 RPEL1Q2QD12 228 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 C6orf89Q6UWU4 347 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 BAIAP2L2Q6UXY1 529 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF782Q6ZMW2 699 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 KLHDC8BQ8IXV7 354 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CHAC2Q8WUX2 184 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SMIM10Q96HG1 83 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 JAM3Q9BX67 310 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 DTX4Q9Y2E6 619 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 BOLA1Q9Y3E2 137 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CSAG2Q9Y5P2 127 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MTORP42345 2549 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 A8MXE2 369 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MAS1P04201 325 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 RPS4Y1P22090 263 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 EMP1P54849 157 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPR50Q13585 617 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM69Q5SWH9 247 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 ADGRG3Q86Y34 549 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PFN4Q8NHR9 129 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 FOXRED1Q96CU9 486 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 NDUFS8O00217 210 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 GLRXP35754 106 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 AP3S2P59780 193 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 C1QTNF12Q5T7M4 302 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 NR2C2APQ86WQ0 139 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SPNS2Q8IVW8 549 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR14K1Q8NGZ2 314 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC7A6Q92536 515 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 COX4I2Q96KJ9 171 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF681Q96N22 645 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CITED1Q99966 193 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CLEC5AQ9NY25 188 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR52A1Q9UKL2 312 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MRPS18CQ9Y3D5 142 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PIEZO2Q9H5I5 2752 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 USP9XQ93008 2570 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 TSTD3H0UI37 97 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 BET1O15155 118 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 XRCC3O43542 346 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MDH2P40926 338 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC35D3Q5M8T2 416 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 LRRC17Q8N6Y2 441 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 KCNJ15Q99712 375 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 MEPEQ9NQ76 525 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PLSCR3Q9NRY6 295 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 NME4O00746 187 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 FADS1O60427 444 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CIDEAO60543 219 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ADRA2CP18825 462 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 HAAOP46952 286 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 DUSP7Q16829 419 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 KRBOX4Q5JUW0 171 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC16A12Q6ZSM3 486 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR5D18Q8NGL1 313 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC25A19Q9HC21 320 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 P2RY10O00398 339 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ENTPD6O75354 484 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 RPL31P62899 125 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 NFAM1Q8NET5 270 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR1K1Q8NGR3 316 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 OCSTAMPQ9BR26 566 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 NDUFAF4Q9P032 175 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 MPC1Q9Y5U8 109 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ANAPC1Q9H1A4 1944 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms