RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 DYNLRB2Q8TF09 96 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CLDN23Q96B33 292 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 OR2V2Q96R30 315 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CYB561P49447 251 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 SPEM2Q0P670 501 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CDC20Q12834 499 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 OR2W3Q7Z3T1 314 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ZDHHC22Q8N966 263 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CSF3RQ99062 836 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ANKRD10Q9NXR5 420 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 LDB3O75112 727 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 SS18L1O75177 396 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 PRDX2P32119 198 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 CLEC4CQ8WTT0 213 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 FGF21Q9NSA1 209 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 SERINC4A6NH21 518 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 ABLIM3O94929 683 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 UBE2L3P68036 154 aaKnown RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 SLC38A11Q08AI6 406 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 TCF23Q7RTU1 214 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 BHLHE23Q8NDY6 225 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 RND1Q92730 232 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 GMPPAQ96IJ6 420 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 FOXC2Q99958 501 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 GLIS2Q9BZE0 524 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 RBFOX3A6NFN3 312 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 SLC25A34Q6PIV7 304 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 FAM216AQ8WUB2 273 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 A0A0D9SEW6 157 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 AQP6Q13520 282 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 NKAIN1Q4KMZ8 207 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 WDFY1Q8IWB7 410 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF391Q9UJN7 358 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 A0A1W2PQM1 296 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 CSO75390 466 aaKnown RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 T-ENOLP0DO92 83 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF324BQ6AW86 544 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-202ENST00000448238 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 ADGRB3O60242 1522 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 RER1O15258 196 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF415Q09FC8 603 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 TMEM95Q3KNT9 176 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 RHBDD1Q8TEB9 315 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 SCAMP4Q969E2 229 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 TEX101Q9BY14 249 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 VSIG4Q9Y279 399 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 GLI2P10070 1586 aa8.09□□□□□ -1.11
NIPBL-202ENST00000448238 A8MWL6 223 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 CHST1O43916 411 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 GP1BAP07359 652 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 MAS1LP35410 378 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 DLEU7Q6UYE1 221 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 UMODL1-AS1Q8N2C9 162 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 OR1N1Q8NGS0 311 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 DERL3Q96Q80 235 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 C5AR2Q9P296 337 aa8.09□□□□□ -1.12
NIPBL-202ENST00000448238 FRMPD1Q5SYB0 1578 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 FRS3O43559 492 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 FAM189BP81408 668 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 FOXK2Q01167 660 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 DUSP5Q16690 384 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 PELI3Q8N2H9 469 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 VAX2Q9UIW0 290 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TRAV8-7A0A075B6U6 113 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 CST7O76096 145 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 GZMKP49863 264 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 IL13RA2Q14627 380 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 MICBQ29980 383 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 CBARPQ8N350 705 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 OR1B1Q8NGR6 318 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 R3HDM4Q96D70 268 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 NPY6RQ99463 290 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 CTRCQ99895 268 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 RAB33BQ9H082 229 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 CHST8Q9H2A9 424 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 FLRT3Q9NZU0 649 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 ATRNO75882 1429 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 C11orf94C9JXX5 98 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 GASTP01350 101 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 IL2RAP01589 272 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 JUNBP17275 347 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 EIF3IQ13347 325 aaKnown RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 Q6ZSR6 202 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 OR5A1Q8NGJ0 315 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 PARLQ9H300 379 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 AUP1Q9Y679 476 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 PVRP15151 417 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 JAG1P78504 1218 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TIAL1Q01085 375 aaKnown RBP eCLIP8.08□□□□□ -1.123e-8■■■■■ 45.5
NIPBL-202ENST00000448238 PP6455Q8WZ26 134 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 NPFFR1Q9GZQ6 430 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms