RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TEX38Q6PEX7 206 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 GALNTL5Q7Z4T8 443 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 PRSS58Q8IYP2 241 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 MFSD9Q8NBP5 474 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 OR6N2Q8NGY6 317 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 FAM213BQ8TBF2 198 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 ERGIC1Q969X5 290 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 TBC1D29Q9UFV1 150 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 CGGBP1Q9UFW8 167 aaPredicted RBP16.96■□□□□ 0.31
HMGA1-205ENST00000447654 OSGIN2Q9Y236 505 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 ZFP30Q9Y2G7 519 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 GON4LQ3T8J9 2241 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 GEMIN2O14893 280 aaKnown RBP16.96■□□□□ 0.31
HMGA1-205ENST00000447654 IFNA21P01568 189 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 GSTP1P09211 210 aaKnown RBP16.96■□□□□ 0.31
HMGA1-205ENST00000447654 NOVA1P51513 510 aaKnown RBP16.96■□□□□ 0.31
HMGA1-205ENST00000447654 TMEM241Q24JQ0 296 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 HYAL4Q2M3T9 481 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 SP5Q6BEB4 398 aaPredicted RBP16.96■□□□□ 0.31
HMGA1-205ENST00000447654 POMZP3Q6PJE2 187 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 ZNF550Q7Z398 422 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 TGIF2LYQ8IUE0 185 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 RAB42Q8N4Z0 105 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 TMEM156Q8N614 296 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 RBMXL1Q96E39 390 aaKnown RBP16.96■□□□□ 0.31
HMGA1-205ENST00000447654 SLC25A44Q96H78 314 aaPredicted RBP16.96■□□□□ 0.31
HMGA1-205ENST00000447654 RHBDD3Q9Y3P4 386 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 WSB1Q9Y6I7 421 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 TSPAN2O60636 221 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 SCAF4O95104 1147 aaKnown RBP16.95■□□□□ 0.3
HMGA1-205ENST00000447654 PGA3P0DJD8 388 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 BRS3P32247 399 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 ECI1P42126 302 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 PRDX4Q13162 271 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 TAF9Q16594 264 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 SLC22A6Q4U2R8 563 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 C4orf17Q53FE4 359 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 SLC26A10Q8NG04 563 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 OTOSQ8NHW6 89 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 ARSGQ96EG1 525 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 C6orf106Q9H6K1 298 aaPredicted RBP16.95■□□□□ 0.3
HMGA1-205ENST00000447654 SEMA5BQ9P283 1151 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 CHTOPQ9Y3Y2 248 aaKnown RBP16.95■□□□□ 0.3
HMGA1-205ENST00000447654 SCN3AQ9NY46 2000 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 ARHGEF17Q96PE2 2063 aaPredicted RBP16.95■□□□□ 0.3
HMGA1-205ENST00000447654 A0A1W2PN81 502 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 DHRS7CA6NNS2 312 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 IL6RP08887 468 aaPredicted RBP16.95■□□□□ 0.3
HMGA1-205ENST00000447654 IFI6P09912 130 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 OR4A8P0C604 315 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 GIMD1P0DJR0 217 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 CHRNA7P36544 502 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 RBMXP38159 391 aaKnown RBP16.95■□□□□ 0.3
HMGA1-205ENST00000447654 IDH3GP51553 393 aaPredicted RBP16.95■□□□□ 0.3
HMGA1-205ENST00000447654 GPR18Q14330 331 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 CHRFAM7AQ494W8 412 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 NCR3LG1Q68D85 454 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 SPSB3Q6PJ21 355 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 OR2L3Q8NG85 312 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 LIPHQ8WWY8 451 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 OR1E3Q8WZA6 343 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 GPR173Q9NS66 373 aa16.95■□□□□ 0.3
HMGA1-205ENST00000447654 A0A1B0GU03 582 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 PRSS38A1L453 326 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 A8MXE2 369 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 OR10J1P30954 320 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 LTBRP36941 435 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 POLR2HP52434 150 aaKnown RBP16.94■□□□□ 0.3
HMGA1-205ENST00000447654 ICAM4Q14773 271 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 DPY19L4Q7Z388 723 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 AGBL5Q8NDL9 886 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 SCARF2Q96GP6 870 aaPredicted RBP16.94■□□□□ 0.3
HMGA1-205ENST00000447654 GAL3ST4Q96RP7 486 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 PYGO2Q9BRQ0 406 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 ELOVL3Q9HB03 270 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 COLEC10Q9Y6Z7 277 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 TCRBV21S2A2A0A5A6 115 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 XKRY2A2RUG3 117 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 DCDC2BA2VCK2 349 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 XKRYO14609 159 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 SIAH2O43255 324 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 DNASE1L1P49184 302 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 ROM1Q03395 351 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 MFGE8Q08431 387 aaPredicted RBP16.94■□□□□ 0.3
HMGA1-205ENST00000447654 FOXF1Q12946 379 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 RD3Q7Z3Z2 195 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 IFI44Q8TCB0 444 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 TSACCQ96A04 125 aaPredicted RBP16.94■□□□□ 0.3
HMGA1-205ENST00000447654 C20orf144Q9BQM9 153 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 WFDC1Q9HC57 220 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 ZNF346Q9UL40 294 aaKnown RBP16.94■□□□□ 0.3
HMGA1-205ENST00000447654 HIF3AQ9Y2N7 669 aa16.94■□□□□ 0.3
HMGA1-205ENST00000447654 KLK2P20151 261 aa16.93■□□□□ 0.3
HMGA1-205ENST00000447654 TLX1P31314 330 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-205ENST00000447654 RANP62826 216 aaKnown RBP16.93■□□□□ 0.3
HMGA1-205ENST00000447654 BTG2P78543 158 aa16.93■□□□□ 0.3
HMGA1-205ENST00000447654 QRFPP83859 136 aa16.93■□□□□ 0.3
HMGA1-205ENST00000447654 FHL5Q5TD97 284 aa16.93■□□□□ 0.3
HMGA1-205ENST00000447654 MRGPRX1Q96LB2 322 aa16.93■□□□□ 0.3
HMGA1-205ENST00000447654 HIST1H2AAQ96QV6 131 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms