RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PHF7Q9BWX1 381 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-203ENST00000445220 GOLT1BQ9Y3E0 138 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 DLL1O00548 723 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 CHRNA7P36544 502 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 GPM6AP51674 278 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 PCBP3P57721 371 aaKnown RBP16.71■□□□□ 0.27
SHANK3-203ENST00000445220 WDR38Q5JTN6 314 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 ZNF573Q86YE8 665 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 BAHD1Q8TBE0 780 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-203ENST00000445220 PP6455Q8WZ26 134 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 C4orf45Q96LM5 186 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 FER1L6-AS2Q96M78 137 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 LRP12Q9Y561 859 aa16.71■□□□□ 0.27
SHANK3-203ENST00000445220 G3V3Y1 287 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 ZNF121P58317 390 aaPredicted RBP16.7■□□□□ 0.26
SHANK3-203ENST00000445220 FAM78BQ5VT40 261 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 STUMQ69YW2 141 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 EXTL1Q92935 676 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 MED29Q9NX70 200 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 ABCD4O14678 606 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 ERVS71-1P61550 626 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 RPL24P83731 157 aaKnown RBP16.7■□□□□ 0.26
SHANK3-203ENST00000445220 ZNF749O43361 778 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 CLEC3BP05452 202 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 C7orf66A4D0T2 115 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 IGHA1P01876 353 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 PTGFRP43088 359 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 LINC00518Q8N0U6 118 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 PLAC1Q9HBJ0 212 aa16.7■□□□□ 0.26
SHANK3-203ENST00000445220 ERVH48-1M5A8F1 160 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 CRISP2P16562 243 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 OTPQ5XKR4 325 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 LSRQ86X29 649 aaPredicted RBP16.69■□□□□ 0.26
SHANK3-203ENST00000445220 MYEOVQ96EZ4 313 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 RAB33BQ9H082 229 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 C6orf106Q9H6K1 298 aaPredicted RBP16.69■□□□□ 0.26
SHANK3-203ENST00000445220 OR5H15A6NDH6 313 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 OR5H1A6NKK0 313 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 SIRPB1O00241 398 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
SHANK3-203ENST00000445220 ZNF207O43670 478 aaKnown RBP16.69■□□□□ 0.26
SHANK3-203ENST00000445220 GLULP15104 373 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 ABOP16442 354 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 NKAIN2Q5VXU1 208 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 SLC25A26Q70HW3 274 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 NKX6-3A6NJ46 265 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 TIAL1Q01085 375 aaKnown RBP eCLIP16.69■□□□□ 0.264e-6■■■□□ 15.2
SHANK3-203ENST00000445220 OR5I1Q13606 314 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 FFAR4Q5NUL3 377 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 FAM219BQ5XKK7 198 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 SH3BGRL2Q9UJC5 107 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 FAM24AA6NFZ4 105 aa16.69■□□□□ 0.26
SHANK3-203ENST00000445220 SMAD4Q13485 552 aaKnown RBP16.69■□□□□ 0.26
SHANK3-203ENST00000445220 A0A1W2PPE2 198 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 CDK2AP1O14519 115 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 C1QAP02745 245 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 NHLH1Q02575 133 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 NHLH2Q02577 135 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 C16orf52Q8NHV5 167 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 OR10C1Q96KK4 312 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 TMPRSS13Q9BYE2 586 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 ZNF552Q9H707 407 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 A0A087WUJ7 227 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 MED19A0JLT2 244 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 RRP8O43159 456 aaKnown RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 PLRG1O43660 514 aaKnown RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 OR8B8Q15620 311 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 NSUN5P2Q63ZY6 315 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 MYPOPQ86VE0 399 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 ANAPC16Q96DE5 110 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 MVB12AQ96EY5 273 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 PCDHGA9Q9Y5G4 932 aaKnown RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 LIPGQ9Y5X9 500 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 THSD7AQ9UPZ6 1657 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 SCGB1C2P0DMR2 95 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 ERHP84090 104 aaKnown RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 PAX5Q02548 391 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 NEIL1Q96FI4 390 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-203ENST00000445220 ARHGAP5-AS1Q96IT6 56 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 OXGR1Q96P68 337 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 NDFIP1Q9BT67 221 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 AMDHD2Q9Y303 409 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 ADAMTS7Q9UKP4 1686 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 H0YIG0 161 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 M0R1X1 148 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 SELEP16581 610 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 DLK1P80370 383 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 FAM3AP98173 230 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 IRF3Q14653 427 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 Q1RN00 199 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 NKAIN1Q4KMZ8 207 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 PCED1AQ9H1Q7 454 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 NAA60Q9H7X0 242 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 ZNF835Q9Y2P0 537 aa16.68■□□□□ 0.26
SHANK3-203ENST00000445220 K7ERU9 68 aa16.67■□□□□ 0.26
SHANK3-203ENST00000445220 GPR37O15354 613 aa16.67■□□□□ 0.26
SHANK3-203ENST00000445220 PIAS2O75928 621 aa16.67■□□□□ 0.26
SHANK3-203ENST00000445220 OR1D5P58170 312 aa16.67■□□□□ 0.26
SHANK3-203ENST00000445220 VHLLQ6RSH7 139 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms