RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 GPR179Q6PRD1 2367 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 CADP27708 2225 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 HSPB1P04792 205 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZNF43P17038 809 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 BTNL3Q6UXE8 466 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ASB5Q8WWX0 329 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 MRPL24Q96A35 216 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 SMIM7Q9BQ49 75 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.46□□□□□ -1.7
HERC1-201ENST00000443617 WNT6Q9Y6F9 365 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 CRYABP02511 175 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 GABRA4P48169 554 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 DPPA3Q6W0C5 159 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SLC16A14Q7RTX9 510 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 OR8D2Q9GZM6 311 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 NXT1Q9UKK6 140 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 ADAMTSL1Q8N6G6 1762 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 DHRS7CA6NNS2 312 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SSSCA1O60232 199 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZAR1Q86SH2 424 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 LINC01555Q8NAE3 123 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 OR13G1Q8NGZ3 307 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 BTF3L4Q96K17 158 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 DIRC2Q96SL1 478 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ABCA7Q8IZY2 2146 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 AQP7O14520 342 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 OR10J1P30954 320 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ROM1Q03395 351 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 C17orf78Q8N4C9 275 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 PLA2G2EQ9NZK7 142 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 HSF4Q9ULV5 492 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 MTCL1Q9Y4B5 1905 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 DOCK10Q96BY6 2186 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SERPINE3A8MV23 424 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 PHF1O43189 567 aaPredicted RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 C9orf131Q5VYM1 1079 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 GKN2Q86XP6 184 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZNF100Q8IYN0 542 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TSLPQ969D9 159 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ACY3Q96HD9 319 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ACTR3CQ9C0K3 210 aaPredicted RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 NAA60Q9H7X0 242 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZNF586Q9NXT0 402 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TUBD1Q9UJT1 453 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 HS3ST3B1Q9Y662 390 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 STRCP1A6NGW2 1772 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 CHD3Q12873 2000 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 BCL2P10415 239 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ADH5P11766 374 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 GJA4P35212 333 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SAPCD1Q5SSQ6 148 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 LINC01590Q5TEZ4 76 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 C1orf140Q5VVS0 124 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 PLPP4Q5VZY2 271 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 CAPNS2Q96L46 248 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SYT3Q9BQG1 590 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 RIMS4Q9H426 269 aaPredicted RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 SLC2A4RGQ9NR83 387 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 RCL1Q9Y2P8 373 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 RHBDD3Q9Y3P4 386 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TMEM210A6NLX4 147 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 CST7O76096 145 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 IL12BP29460 328 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SLC37A1P57057 533 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 LINC00346Q8IVM7 164 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 NEK7Q8TDX7 302 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TOMM40LQ969M1 308 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 KIAA1456Q9P272 454 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TRAPPC1Q9Y5R8 145 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 LCN15Q6UWW0 184 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZNF695Q8IW36 515 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SLC38A9Q8NBW4 561 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 OR4D6Q8NGJ1 314 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 OR2T10Q8NGZ9 312 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 HIST1H2AAQ96QV6 131 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 NUDT16L1Q9BRJ7 211 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 TXNIPQ9H3M7 391 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TNCP24821 2201 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZFP92A6NM28 416 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 LDLRAD4O15165 306 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TIMP1P01033 207 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TMEM52BQ4KMG9 183 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 THEM4Q5T1C6 240 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 FAM166AQ6J272 317 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 VN1R4Q7Z5H5 301 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 LYPD6BQ8NI32 183 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ARRDC3Q96B67 414 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 REEP6Q96HR9 211 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SNHG12Q9BXW3 62 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 GPR84Q9NQS5 396 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 NYNRINQ9P2P1 1898 aaKnown RBP4.46□□□□□ -1.7
HERC1-201ENST00000443617 A0A1W2PPV9 198 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 SOD2P04179 222 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 FUT3P21217 361 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 PPM1AP35813 382 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 LBX1P52954 281 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms