RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 DLL1O00548 723 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 SNAPC5O75971 98 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 ANXA3P12429 323 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 TAS2R31P59538 309 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 RPS23P62266 143 aaKnown RBP5.21□□□□□ -1.58
VPS50-205ENST00000441602 PDZK1IP1Q13113 114 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 TNK1Q13470 666 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 GK2Q14410 553 aaPredicted RBP5.21□□□□□ -1.58
VPS50-205ENST00000441602 CEACAM21Q3KPI0 293 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 FBXW12Q6X9E4 464 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 FAM89BQ8N5H3 189 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 SPERTQ8NA61 448 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 RHOFQ9HBH0 211 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 SPACA1Q9HBV2 294 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 E9PLN8 166 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 MSTNO14793 375 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 PLATP00750 562 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 CD74P04233 296 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 SFTPCP11686 197 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 ECI1P42126 302 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 TSPAN5P62079 268 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 ZNF718Q3SXZ3 478 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 NKAPLQ5M9Q1 402 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 VWA1Q6PCB0 445 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 ASCL4Q6XD76 172 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 TMEM200AQ86VY9 491 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 CXorf67Q86X51 503 aaPredicted RBP5.21□□□□□ -1.58
VPS50-205ENST00000441602 LIX1LQ8IVB5 337 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 PAQR4Q8N4S7 273 aaPredicted RBP5.21□□□□□ -1.58
VPS50-205ENST00000441602 ARRDC1Q8N5I2 433 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 ZNF610Q8N9Z0 462 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 OR51F2Q8NH61 342 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 GIMAP1Q8WWP7 306 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 SNAPC3Q92966 411 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 NKX3-1Q99801 234 aaPredicted RBP5.21□□□□□ -1.58
VPS50-205ENST00000441602 PKIBQ9C010 78 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 HSF4Q9ULV5 492 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 POLDIP2Q9Y2S7 368 aa5.21□□□□□ -1.58
VPS50-205ENST00000441602 PHF3Q92576 2039 aaKnown RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 MEIS3P1A6NDR6 274 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 OR5H1A6NKK0 313 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 ZNF732B4DXR9 585 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 CD3DP04234 171 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 PTHLHP12272 177 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 GNB3P16520 340 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 C4BPBP20851 252 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 GABRR1P24046 479 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 BTCP35070 178 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 SELENOVP59797 346 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 ARPC4P59998 168 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 ZP1P60852 638 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 C3orf36Q3SXR2 165 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 CHRFAM7AQ494W8 412 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 PEG10Q86TG7 708 aaKnown RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 LINC00596Q86U02 117 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 Q8IYB0 196 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 CISD2Q8N5K1 135 aaKnown RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 ZDHHC22Q8N966 263 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 OR1J1Q8NGS3 322 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 OR10K1Q8NGX5 313 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 OR4K15Q8NH41 348 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 NUDCD2Q8WVJ2 157 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 Q96M66 194 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 PECRQ9BY49 303 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 LUZP4Q9P127 313 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 ZNF222Q9UK12 451 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 RIF1Q5UIP0 2472 aaKnown RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 PTPRZ1P23471 2315 aaPredicted RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 PQLC2LA1A4F0 135 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 VSTM5A8MXK1 200 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 J3QT63 122 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 MFNGO00587 321 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 SOCS1O15524 211 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 PDCD6O75340 191 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 PDGFAP04085 211 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 FCER2P06734 321 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 CCL2P13500 99 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 ZNF14P17017 642 aaPredicted RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 MPZP25189 248 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 PMELP40967 661 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 CXADRP78310 365 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 LINC00303Q3SY05 128 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 MOGAT2Q3SYC2 334 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 SCGB2B2Q4G0G5 96 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 TIMM23BQ5SRD1 257 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 ATAD3CQ5T2N8 411 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 RFPL4BQ6ZWI9 263 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 SLC25A26Q70HW3 274 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 GLCCI1Q86VQ1 547 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 TCTE3Q8IZS6 198 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 TMEM104Q8NE00 496 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 EXTL1Q92935 676 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 STARD4Q96DR4 205 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 LRRC46Q96FV0 321 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 ARHGAP5-AS1Q96IT6 56 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 C1orf147Q96MC9 270 aaPredicted RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 CMSS1Q9BQ75 279 aaKnown RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 OCSTAMPQ9BR26 566 aa5.2□□□□□ -1.58
VPS50-205ENST00000441602 OPN3Q9H1Y3 402 aaPredicted RBP5.2□□□□□ -1.58
VPS50-205ENST00000441602 GLS2Q9UI32 602 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms