RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 M0R1B8 84 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 LANCL1O43813 399 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 STOMP27105 288 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 EFNB2P52799 333 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 BSPH1Q075Z2 132 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 FAM189A2Q15884 450 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 RSBN1Q5VWQ0 802 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 LYPD6Q86Y78 171 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CELF2-AS1Q8N7Q2 184 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CPEB3Q8NE35 698 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 NPRL2Q8WTW4 380 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 NEUROG1Q92886 237 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 LURAP1Q96LR2 239 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 GAL3ST1Q99999 423 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 USB1Q9BQ65 265 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 LIME1Q9H400 295 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 AMDHD2Q9Y303 409 aa12.52□□□□□ -0.41
TNFRSF1A-204ENST00000440083 hCG_38984A0A1B0GV85 526 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 LDLRAD4O15165 306 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 KDM4BO94953 1096 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ALX3O95076 343 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 SERPINA5P05154 406 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CELA3BP08861 270 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 PRKACBP22694 351 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 OR3A4PP47883 348 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 GPR176Q14439 515 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 RAB12Q6IQ22 244 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ADAM5Q6NVV9 412 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 GLIPR1L1Q6UWM5 242 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 MRPL21Q7Z2W9 205 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 MDP1Q86V88 176 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 MYPOPQ86VE0 399 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ANGPTL5Q86XS5 388 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 OR52I2Q8NH67 350 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 APOBEC3DQ96AK3 386 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 SPSB1Q96BD6 273 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 S100A13Q99584 98 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 MMP28Q9H239 520 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 DPAGT1Q9H3H5 408 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 OPA3Q9H6K4 179 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 GPR173Q9NS66 373 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 B3GNT2Q9NY97 397 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 MYEF2Q9P2K5 600 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 RHBDD3Q9Y3P4 386 aa12.51□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ZNF816-ZNF321PA0A0X1KG74 233 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 HNRNPCP07910 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 SRP9P49458 86 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 GSK3AP49840 483 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 DYRK1AQ13627 763 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 TBC1D28Q2M2D7 210 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CLVS2Q5SYC1 327 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CADM3Q8N126 398 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 GCDHQ92947 438 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 PIGTQ969N2 578 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ITPKCQ96DU7 683 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 BOD1Q96IK1 185 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 TECTBQ96PL2 329 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 TMEM204Q9BSN7 226 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 PLEKHF2Q9H8W4 249 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 UBTD1Q9HAC8 227 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 NLKQ9UBE8 527 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 GHRLQ9UBU3 117 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 FBLN5Q9UBX5 448 aa12.5□□□□□ -0.41
TNFRSF1A-204ENST00000440083 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 LOC100509620A0A075B734 347 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 IGHV1-18A0A0C4DH31 117 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 IGKV1-9A0A0C4DH69 117 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 NAP1L6A6NFF2 107 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ORC5O43913 435 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 RBBP9O75884 186 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 MPIG6BO95866 241 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CD3EP07766 207 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CD40P25942 277 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 PRSS3P35030 304 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 FAUP35544 74 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 FAM3AP98173 230 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ZNF92Q03936 586 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 KLF9Q13886 244 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 KISS1Q15726 138 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 UBE2V2Q15819 145 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ZBTB37Q5TC79 503 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 OR10K2Q6IF99 312 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 LHFPL2Q6ZUX7 228 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 KCNG3Q8TAE7 436 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 TNFAIP8L1Q8WVP5 186 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 SPSB4Q96A44 273 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 POM121L2Q96KW2 1035 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CST11Q9H112 138 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 CDH20Q9HBT6 801 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 NGBQ9NPG2 151 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 TAS2R8Q9NYW2 309 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 PTTG3PQ9NZH4 202 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 ING4Q9UNL4 249 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 SLC7A11Q9UPY5 501 aa12.49□□□□□ -0.41
TNFRSF1A-204ENST00000440083 RNF115Q9Y4L5 304 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms