RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 HAAOP46952 286 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 POU3F4P49335 361 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 TNFAIP6P98066 277 aaPredicted RBP17.59■□□□□ 0.41
CHD3-204ENST00000439235 PCGF3Q3KNV8 242 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 FAM209AQ5JX71 171 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 FAM166AQ6J272 317 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 TNFAIP8L1Q8WVP5 186 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 ACOT12Q8WYK0 555 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 C14orf79Q96F83 325 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 SLIRPQ9GZT3 109 aaKnown RBP17.59■□□□□ 0.41
CHD3-204ENST00000439235 PLEKHB1Q9UF11 243 aaPredicted RBP17.59■□□□□ 0.41
CHD3-204ENST00000439235 IL19Q9UHD0 177 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 MRPS28Q9Y2Q9 187 aaKnown RBP17.59■□□□□ 0.41
CHD3-204ENST00000439235 CADP27708 2225 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 CYB5AP00167 134 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 CD55P08174 381 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 DANCRP0C864 163 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 UBBP0CG47 229 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 PTGFRP43088 359 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 OR3A4PP47883 348 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 ZP1P60852 638 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 DYNC1I2Q13409 638 aaKnown RBP17.58■□□□□ 0.4
CHD3-204ENST00000439235 FAM76BQ5HYJ3 339 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 AWAT2Q6E213 333 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 C20orf204Q6ZNR8 217 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 WDR86Q86TI4 376 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 TMEM200AQ86VY9 491 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 OR4D6Q8NGJ1 314 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 OR5D18Q8NGL1 313 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 ZNF671Q8TAW3 534 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 MEGF10Q96KG7 1140 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 S100A13Q99584 98 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 NKX3-1Q99801 234 aaPredicted RBP17.58■□□□□ 0.4
CHD3-204ENST00000439235 PKIBQ9C010 78 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 EGLN1Q9GZT9 426 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 OR51I2Q9H344 312 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 ABRACLQ9P1F3 81 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 GHRLQ9UBU3 117 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 PMF1-BGLAPU3KQ54 211 aa17.58■□□□□ 0.4
CHD3-204ENST00000439235 J3QT63 122 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 PLATP00750 562 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 GRPP07492 148 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 TMEM225BP0DP42 221 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 CALCBP10092 127 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 SCAND1P57086 179 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 ZNF154Q13106 437 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 PDZK1IP1Q13113 114 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 MAB21L1Q13394 359 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 TESK1Q15569 626 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 ZNF404Q494X3 552 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 C11orf71Q6IPW1 123 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 MZT2AQ6P582 158 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 HAGHLQ6PII5 290 aaPredicted RBP17.57■□□□□ 0.4
CHD3-204ENST00000439235 CRIP3Q6Q6R5 217 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 RNF144BQ7Z419 303 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 ANGPTL5Q86XS5 388 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 ZSCAN4Q8NAM6 433 aaPredicted RBP17.57■□□□□ 0.4
CHD3-204ENST00000439235 MCFD2Q8NI22 146 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 OR2V2Q96R30 315 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 TRAF4Q9BUZ4 470 aaPredicted RBP17.57■□□□□ 0.4
CHD3-204ENST00000439235 LIN7BQ9HAP6 207 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 POLDIP2Q9Y2S7 368 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 A3GALT2U3KPV4 340 aa17.57■□□□□ 0.4
CHD3-204ENST00000439235 A0A075B6Q4 140 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 LOC100289279A0A1B0GTE1 492 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 A6NLC8 198 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 PTBP3O95758 552 aaKnown RBP17.56■□□□□ 0.4
CHD3-204ENST00000439235 BPNT1O95861 308 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 SOD3P08294 240 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 MPZP25189 248 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 P2RY14Q15391 338 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 PRAMEF6Q5VXH4 476 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 GLIPR1L1Q6UWM5 242 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 MKXQ8IYA7 352 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 SAXO1Q8IYX7 474 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 PXT1Q8NFP0 134 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 TBC1D15Q8TC07 691 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 ITLN1Q8WWA0 313 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 SLC25A28Q96A46 364 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 TLNRD1Q9H1K6 362 aa17.56■□□□□ 0.4
CHD3-204ENST00000439235 TPD52L2O43399 206 aaKnown RBP17.55■□□□□ 0.4
CHD3-204ENST00000439235 ARSBP15848 533 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 TNFRSF1AP19438 455 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 COL8A1P27658 744 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 GATA4P43694 442 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 CLDN12P56749 244 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 IL24Q13007 206 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 SLC25A26Q70HW3 274 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 CALHM1Q8IU99 346 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 SCCPDHQ8NBX0 429 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 ERGIC1Q969X5 290 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 FAM3DQ96BQ1 224 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 METTL9Q9H1A3 318 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 PLEKHF2Q9H8W4 249 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 FN3KRPQ9HA64 309 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 SMURF1Q9HCE7 757 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 DECR2Q9NUI1 292 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 ING4Q9UNL4 249 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 ETV7Q9Y603 341 aa17.55■□□□□ 0.4
CHD3-204ENST00000439235 FLNCQ14315 2725 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms