RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CD28P10747 220 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 MCF2P10911 925 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 PRPS2P11908 318 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ADRB3P13945 408 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 KCNE1P15382 129 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HPGDP15428 266 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF823P16415 610 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SRMP19623 302 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 TBXA2RP21731 343 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HSPA9P38646 679 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC1A1P43005 524 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CRYBB2P43320 205 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HTR5AP47898 357 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CCT3P49368 545 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 VSNL1P62760 191 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 TNNC1P63316 161 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 DCDP81605 110 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 RIPPLY1Q0D2K3 151 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 MERTKQ12866 999 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 EXOSC2Q13868 293 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CASP8Q14790 479 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 UBE2V2Q15819 145 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 LGALS9BQ3B8N2 356 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HIKESHIQ53FT3 197 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLX4IPQ5VYV7 408 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 PLCXD3Q63HM9 321 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR5M10Q6IEU7 315 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR8G2PQ6IF36 304 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 DEGS2Q6QHC5 323 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 BTNL3Q6UXE8 466 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ALKAL1Q6UXT8 129 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 LRRC31Q6UY01 552 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HACD2Q6Y1H2 254 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 EIF3MQ7L2H7 374 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 NDUFAF7Q7L592 441 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ARCQ7LC44 396 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SSX9Q7RTT3 188 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 H2BFWTQ7Z2G1 175 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 C16orf62Q7Z3J2 963 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HSD11B1LQ7Z5J1 315 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HSD17B13Q7Z5P4 300 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CROCCP2Q86T23 111 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM17Q86X19 198 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 NELFCDQ8IXH7 590 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 GTPBP8Q8N3Z3 284 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CLDN19Q8N6F1 224 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 TRIML2Q8N7C3 387 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 FBXL13Q8NEE6 735 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM83FQ8NEG4 500 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR4K14Q8NGD5 310 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ANGPTL6Q8NI99 470 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 PNPT1Q8TCS8 783 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 LKAAEAR1Q8TD35 194 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 C17orf50Q8WW18 174 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 MAIP1Q8WWC4 291 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ELMO1Q92556 727 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC38A4Q969I6 547 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 NTAN1Q96AB6 310 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SGK3Q96BR1 496 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 UPRTQ96BW1 309 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 FGGYQ96C11 551 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 DNAJA3Q96EY1 480 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 HPDLQ96IR7 371 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 AKR1E2Q96JD6 320 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CEP170P1Q96L14 293 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SMIM14Q96QK8 99 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 IL4I1Q96RQ9 567 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 NRTNQ99748 197 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 KCNS3Q9BQ31 491 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CNPY3Q9BT09 278 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM109Q9BVC6 243 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SFXN3Q9BWM7 321 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SPATA16Q9BXB7 569 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 DUSP16Q9BY84 665 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 GLIPR2Q9H4G4 154 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ASB7Q9H672 318 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 LRRC19Q9H756 370 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 ELOVL3Q9HB03 270 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SPACA1Q9HBV2 294 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC2A8Q9NY64 477 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 MRPL39Q9NYK5 338 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 DCDC2Q9UHG0 476 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 PCYOX1Q9UHG3 505 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 OPN4Q9UHM6 478 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 CDH9Q9ULB4 789 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 RPH3ALQ9UNE2 315 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 SAMD4AQ9UPU9 718 aaKnown RBP1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 C15orf41Q9Y2V0 281 aa1.5□□□□□ -2.17
HMGB1P18-201ENST00000438801 TRBV11-1A0A0K0K1C0 115 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 DHRS7CA6NNS2 312 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 LRRIQ3A6PVS8 624 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 SERPINE3A8MV23 424 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 GOLGA8KD6RF30 607 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 E7EQ34 232 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 F8VP50 259 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 GOLGA8TH3BQL2 631 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PGRMC1O00264 195 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC16A4O15374 487 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RNF13O43567 381 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 KDELR3O43731 214 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms