RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 RAB27BO00194 218 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 SSSCA1O60232 199 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 IGHEP01854 428 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 CTSBP07858 339 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 CTRB1P17538 263 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 RAB11AP62491 216 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 C1orf100Q5SVJ3 147 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 CTRB2Q6GPI1 263 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ANKRD37Q7Z713 158 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 OR6X1Q8NH79 312 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF721Q8TF20 911 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 MYOTQ9UBF9 498 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 GBF1Q92538 1859 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 AHCTF1Q8WYP5 2266 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 IGHV1OR15-9A0A0B4J2B8 117 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 RNF212BA8MTL3 300 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF587BE7ETH6 402 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 NPIPB9F8W1W9 429 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 CXCL13O43927 109 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 HPP00738 406 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 TTRP02766 147 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 IGHV4-34P06331 123 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 FGF2P09038 288 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ZBTB25P24278 435 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 LIMK1P53667 647 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 TGFBR3Q03167 851 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 MOGAT2Q3SYC2 334 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 RNF212Q495C1 297 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 FDX2Q6P4F2 183 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 DRAM2Q6UX65 266 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ZFP62Q8NB50 900 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-205ENST00000438362 NUBPLQ8TB37 319 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 FAAP24Q9BTP7 215 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 PHF7Q9BWX1 381 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-205ENST00000438362 SEC11CQ9BY50 192 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 FOXQ1Q9C009 403 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 MAGT1Q9H0U3 335 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 CALHM2Q9HA72 323 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 C19orf12Q9NSK7 152 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 MRPL22Q9NWU5 206 aaKnown RBP5.93□□□□□ -1.46
CSDE1-205ENST00000438362 KCNK7Q9Y2U2 307 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ADAM11O75078 769 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 HOXD4P09016 255 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 B4GALT1P15291 398 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 TMEM33P57088 247 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 NAAAQ02083 359 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF260Q3ZCT1 412 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 SLC36A1Q7Z2H8 476 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 LSRQ86X29 649 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 FAM185AQ8N0U4 392 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 BHLHE23Q8NDY6 225 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 AKR7LQ8NHP1 331 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 LIN37Q96GY3 246 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 PCED1AQ9H1Q7 454 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 UCK1Q9HA47 277 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 RCL1Q9Y2P8 373 aaKnown RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 POMT1Q9Y6A1 747 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 MTCL1Q9Y4B5 1905 aaKnown RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 ARHGEF17Q96PE2 2063 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 A0A1B0GTQ1 180 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 A6NCN8 305 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 OR6C6A6NF89 314 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 TTLL8A6PVC2 850 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 CEBPZOSA8MTT3 80 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 LYPD3O95274 346 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 CLDN1O95832 211 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 F10P00742 488 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 MECP2P51608 486 aaKnown RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 FUT6P51993 359 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 SNRPEP62304 92 aaKnown RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF239Q16600 458 aaKnown RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 LINC00114Q6XXX2 140 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 SLC22A18ASQ8N1D0 253 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 CADM4Q8NFZ8 388 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 FRZBQ92765 325 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 HINT2Q9BX68 163 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 PECRQ9BY49 303 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 PLEKHF2Q9H8W4 249 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 SIGLEC5O15389 551 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 EFSO43281 561 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 TSPAN2O60636 221 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 CBR3O75828 277 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 IFNA10P01566 189 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 MT-ND4LP03901 98 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 CTSDP07339 412 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 FUT3P21217 361 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 BCKDHBP21953 392 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 CYB561P49447 251 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 IGLV3-21P80748 117 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 EGR4Q05215 589 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 SIGLEC14Q08ET2 396 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 CATR1Q13166 79 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 HNF4GQ14541 408 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 RHBDD2Q6NTF9 364 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 OR56B2PQ8NGI1 322 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 OR6S1Q8NH40 331 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 OR1F12Q8NHA8 337 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 OR10J5Q8NHC4 309 aa5.92□□□□□ -1.46
CSDE1-205ENST00000438362 MRPS24Q96EL2 167 aaKnown RBP5.92□□□□□ -1.46
CSDE1-205ENST00000438362 ALKBH3Q96Q83 286 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms