RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 PCDHGA1Q9Y5H4 931 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 NUP210LQ5VU65 1888 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 A0A0J9YW62 118 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 P04436 131 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 HLA-GP17693 338 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 PVALBP20472 110 aaPredicted RBP14.67□□□□□ -0.06
TTC3-209ENST00000438055 LSM6P62312 80 aaKnown RBP14.67□□□□□ -0.06
TTC3-209ENST00000438055 PCOLCEQ15113 449 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 RPL7L1Q6DKI1 246 aaKnown RBP14.67□□□□□ -0.06
TTC3-209ENST00000438055 ADPRHL1Q8NDY3 354 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 OR52H1Q8NGJ2 320 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 PP6455Q8WZ26 134 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 MAP1BP46821 2468 aaKnown RBP14.67□□□□□ -0.06
TTC3-209ENST00000438055 A0A1B0GV50 99 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 TMEM218A2RU14 115 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 PATE3B3GLJ2 98 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 K7EPK0 472 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 ZNHIT1O43257 154 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 LRP3O75074 770 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 ATG12O94817 140 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 OR5H8P0DN80 308 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 ADH6P28332 368 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 STARD6P59095 220 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 EIF5AL1Q6IS14 154 aaKnown RBP14.67□□□□□ -0.06
TTC3-209ENST00000438055 PRSS54Q6PEW0 395 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 FAM71E2Q8N5Q1 922 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 EIF4E3Q8N5X7 224 aaKnown RBP14.67□□□□□ -0.06
TTC3-209ENST00000438055 PIGCQ92535 297 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 OCSTAMPQ9BR26 566 aa14.67□□□□□ -0.06
TTC3-209ENST00000438055 RTBDNQ9BSG5 229 aaPredicted RBP14.67□□□□□ -0.06
TTC3-209ENST00000438055 SERPINE3A8MV23 424 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 ABCD4O14678 606 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 CXCL13O43927 109 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 VAMP5O95183 116 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 REEP6Q96HR9 211 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 C1orf123Q9NWV4 160 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 KCNIP3Q9Y2W7 256 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 RPS18P62269 152 aaKnown RBP14.66□□□□□ -0.06
TTC3-209ENST00000438055 ENDOGQ14249 297 aaKnown RBP14.66□□□□□ -0.06
TTC3-209ENST00000438055 ZNF529Q6P280 563 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 AAED1Q7RTV5 226 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 CBLN2Q8IUK8 224 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 CLRN3Q8NCR9 226 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 SAP25Q8TEE9 199 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 TAF9BQ9HBM6 251 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 IGKV1D-8A0A087WSZ0 117 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 DHRS7CA6NNS2 312 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 RCC1P18754 421 aaPredicted RBP14.66□□□□□ -0.06
TTC3-209ENST00000438055 FOLR3P41439 243 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 DSCR4P56555 118 aaPredicted RBP14.66□□□□□ -0.06
TTC3-209ENST00000438055 EIF5AP63241 154 aaKnown RBP14.66□□□□□ -0.06
TTC3-209ENST00000438055 TSPO2Q5TGU0 170 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 AIFM2Q9BRQ8 373 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 CHST5Q9GZS9 411 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 ZNF442Q9H7R0 627 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 FBLN5Q9UBX5 448 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 MCTS1Q9ULC4 181 aaKnown RBP14.66□□□□□ -0.06
TTC3-209ENST00000438055 PADI1Q9ULC6 663 aa14.66□□□□□ -0.06
TTC3-209ENST00000438055 CARD18P57730 90 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 SUPT4H1P63272 117 aaKnown RBP14.65□□□□□ -0.06
TTC3-209ENST00000438055 SRYQ05066 204 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 ARL6IP1Q15041 203 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 NEK7Q8TDX7 302 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 HAS2Q92819 552 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 ACTL6AO96019 429 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 LIFP15018 202 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 MPZP25189 248 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 FKBP2P26885 142 aaKnown RBP14.65□□□□□ -0.06
TTC3-209ENST00000438055 PUSL1Q8N0Z8 303 aaKnown RBP14.65□□□□□ -0.06
TTC3-209ENST00000438055 FBXO17Q96EF6 278 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 GHRLQ9UBU3 117 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 K7ESF4 209 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 DIRAS3O95661 229 aa14.65□□□□□ -0.06
TTC3-209ENST00000438055 SRSF3P84103 164 aaKnown RBP14.65□□□□□ -0.06
TTC3-209ENST00000438055 BARX1Q9HBU1 254 aaPredicted RBP14.65□□□□□ -0.06
TTC3-209ENST00000438055 PRF1P14222 555 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 SRSF4Q08170 494 aaKnown RBP14.64□□□□□ -0.07
TTC3-209ENST00000438055 ZNF616Q08AN1 781 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 EXT1Q16394 746 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 ZNF468Q5VIY5 522 aaPredicted RBP14.64□□□□□ -0.07
TTC3-209ENST00000438055 AADACL3Q5VUY0 350 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 ZNF385CQ66K41 422 aaPredicted RBP14.64□□□□□ -0.07
TTC3-209ENST00000438055 MEX3BQ6ZN04 569 aaKnown RBP14.64□□□□□ -0.07
TTC3-209ENST00000438055 SLC16A14Q7RTX9 510 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 FADS6Q8N9I5 356 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 OR5L1Q8NGL2 311 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 SGK3Q96BR1 496 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 FANCFQ9NPI8 374 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.64□□□□□ -0.072e-7■■■□□ 17.2
TTC3-209ENST00000438055 HS3ST3B1Q9Y662 390 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 IGLV3-32A0A0A0MS00 114 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 TRIM77I1YAP6 450 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 DNASE2O00115 360 aaPredicted RBP14.64□□□□□ -0.07
TTC3-209ENST00000438055 XRCC2O43543 280 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 OR7C1O76099 320 aaPredicted RBP14.64□□□□□ -0.07
TTC3-209ENST00000438055 PRH1P02810 166 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 PTGER4P35408 488 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 PIGPP57054 158 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 FAM76BQ5HYJ3 339 aa14.64□□□□□ -0.07
TTC3-209ENST00000438055 OR2A2Q6IF42 318 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms