RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 ACTA2P62736 377 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 ACTG2P63267 376 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 ACTC1P68032 377 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 ACTA1P68133 377 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 LDLRAD2Q5SZI1 272 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 LCNL1Q6ZST4 164 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 ZDHHC21Q8IVQ6 265 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 C17orf53Q8N3J3 647 aaPredicted RBP12.43□□□□□ -0.42
NUP50-209ENST00000432340 OR10A6Q8NH74 314 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 OR5P3Q8WZ94 311 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 CLEC7AQ9BXN2 247 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 KRCC1Q9NPI7 259 aaPredicted RBP12.43□□□□□ -0.42
NUP50-209ENST00000432340 DPM3Q9P2X0 92 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 MOB4Q9Y3A3 225 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 HSPE1-MOB4S4R3N1 261 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 OR6C68A6NDL8 312 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 RFPL4AA6NLU0 287 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 RFPL4AL1F8VTS6 287 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 IMPA2O14732 288 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 ANGPT2O15123 496 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 ANXA2P07355 339 aaKnown RBP12.42□□□□□ -0.42
NUP50-209ENST00000432340 HCKP08631 526 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 FAM106CPP0CH98 169 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 SLC2A1P11166 492 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 CEACAM3P40198 252 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 GSK3AP49840 483 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 CRYBA2P53672 197 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 CXorf66Q5JRM2 361 aaPredicted RBP12.42□□□□□ -0.42
NUP50-209ENST00000432340 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 CCDC144NLQ6NUI1 221 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 ZBTB46Q86UZ6 589 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 TIGD4Q8IY51 512 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 DRAM1Q8N682 238 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 GATAD1Q8WUU5 269 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 SH3GL1Q99961 368 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 OR10A2Q9H208 303 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 SIGLEC7Q9Y286 467 aa12.42□□□□□ -0.42
NUP50-209ENST00000432340 IGHV2-26A0A0B4J1V2 119 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 hCG_38984A0A1B0GV85 526 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 CCRL2O00421 344 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 RGS16O15492 202 aaPredicted RBP12.41□□□□□ -0.42
NUP50-209ENST00000432340 AMY1AP04745 511 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 AMY2AP04746 511 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 PRDX2P32119 198 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 MNDAP41218 407 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 CDX1P47902 265 aaPredicted RBP12.41□□□□□ -0.42
NUP50-209ENST00000432340 DLX6P56179 175 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 GRB2P62993 217 aaKnown RBP12.41□□□□□ -0.42
NUP50-209ENST00000432340 CBX1P83916 185 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 PRDX4Q13162 271 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 AGKQ53H12 422 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 ERICH5Q6P6B1 374 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 ZNF596Q8TC21 504 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 ZNF714Q96N38 554 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 ANKRD19PQ9H560 264 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 RPRD1BQ9NQG5 326 aaKnown RBP12.41□□□□□ -0.42
NUP50-209ENST00000432340 CENPMQ9NSP4 180 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 SESN1Q9Y6P5 492 aa12.41□□□□□ -0.42
NUP50-209ENST00000432340 A0A087WUU8 490 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 ZNF878C9JN71 531 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 CST4P01036 141 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 PIPP12273 146 aaPredicted RBP12.4□□□□□ -0.42
NUP50-209ENST00000432340 JUNBP17275 347 aaPredicted RBP12.4□□□□□ -0.42
NUP50-209ENST00000432340 DCTDP32321 178 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 GNG3P63215 75 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 ZDHHC23Q8IYP9 409 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 ZNF676Q8N7Q3 588 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 SGK3Q96BR1 496 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 ERMAPQ96PL5 475 aaPredicted RBP12.4□□□□□ -0.42
NUP50-209ENST00000432340 NMNAT3Q96T66 252 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 VIPAS39Q9H9C1 493 aa12.4□□□□□ -0.42
NUP50-209ENST00000432340 SH2D7A6NKC9 451 aaPredicted RBP12.39□□□□□ -0.43
NUP50-209ENST00000432340 ZNF850A8MQ14 1090 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 TK1P04183 234 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 OR8U8P0C7N1 319 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 GP9P14770 177 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 CD24P25063 80 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 MEF2CQ06413 473 aaPredicted RBP12.39□□□□□ -0.43
NUP50-209ENST00000432340 EIF2B1Q14232 305 aaKnown RBP12.39□□□□□ -0.43
NUP50-209ENST00000432340 PNLIPRP3Q17RR3 467 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 DCXRQ7Z4W1 244 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 LINC00476Q8WZB0 136 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 RSRC1Q96IZ7 334 aaKnown RBP12.39□□□□□ -0.43
NUP50-209ENST00000432340 TPD52L3Q96J77 140 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 NRIP2Q9BQI9 281 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 TMEM109Q9BVC6 243 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 CCDC134Q9H6E4 229 aa12.39□□□□□ -0.43
NUP50-209ENST00000432340 hADV38S2A0JD32 116 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 OOSP1A8MZH6 123 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 ARPC3O15145 178 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 HSD11B1P28845 292 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 CX3CR1P49238 355 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 DEFB136Q30KP8 78 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 CYBRD1Q53TN4 286 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 SMARCD3Q6STE5 483 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 EPGNQ6UW88 154 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 ACP7Q6ZNF0 438 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 GDPD3Q7L5L3 318 aa12.38□□□□□ -0.43
NUP50-209ENST00000432340 SLC35E3Q7Z769 313 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms