RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 STARD10Q9Y365 291 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 NPTNQ9Y639 398 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 CACNA1GO43497 2377 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 FUT6P51993 359 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 ATP1B3P54709 279 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 MALLQ13021 153 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 ZBTB37Q5TC79 503 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 MRPL21Q7Z2W9 205 aaKnown RBP16.9■□□□□ 0.3
VRK2-205ENST00000432057 NANOS1Q8WY41 292 aaKnown RBP16.9■□□□□ 0.3
VRK2-205ENST00000432057 SLC25A21Q9BQT8 299 aaPredicted RBP16.9■□□□□ 0.3
VRK2-205ENST00000432057 TMEM246Q9BRR3 403 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■■■■ 33.9
VRK2-205ENST00000432057 PLSCR2Q9NRY7 297 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 CA10Q9NS85 328 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 PLEKHA6Q9Y2H5 1048 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 GTF3C1Q12789 2109 aa16.9■□□□□ 0.3
VRK2-205ENST00000432057 IGKV1-12A0A0C4DH73 117 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 DLL1O00548 723 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 GFRA3O60609 400 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 IGKV1D-12P01611 117 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 PMP2P02689 132 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 APLNRP35414 380 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 GUSBP1Q15486 140 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 ATPAF1Q5TC12 328 aaPredicted RBP16.89■□□□□ 0.29
VRK2-205ENST00000432057 FAM214BQ7L5A3 538 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 NLRC3Q7RTR2 1065 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 DPPA2Q7Z7J5 298 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 C9orf106Q8NAJ2 232 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 ST8SIA4Q92187 359 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 PRRT1Q99946 306 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 SLC2A8Q9NY64 477 aa16.89■□□□□ 0.29
VRK2-205ENST00000432057 FAM172BPA6NC97 362 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 CSTBP04080 98 aaKnown RBP16.88■□□□□ 0.29
VRK2-205ENST00000432057 PDGFAP04085 211 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 NAT1P18440 290 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 IGHV1-2P23083 117 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 WNT5AP41221 380 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 UBE2MP61081 183 aaKnown RBP16.88■□□□□ 0.29
VRK2-205ENST00000432057 CXADRP78310 365 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 LAMTOR1Q6IAA8 161 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 NCCRP1Q6ZVX7 275 aaPredicted RBP16.88■□□□□ 0.29
VRK2-205ENST00000432057 TMED4Q7Z7H5 227 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 SPICQ8N5J4 248 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 CNEP1R1Q8N9A8 125 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 OR4K15Q8NH41 348 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 FBXW5Q969U6 566 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 MRGPRFQ96AM1 343 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 HYLS1Q96M11 299 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 TECTBQ96PL2 329 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 PAPOLGQ9BWT3 736 aaKnown RBP16.88■□□□□ 0.29
VRK2-205ENST00000432057 ESPL1Q14674 2120 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 UBE2QL1A1L167 161 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 RGS13O14921 159 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 MPZP25189 248 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 PRDX4Q13162 271 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 MICBQ29980 383 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 C4orf46Q504U0 113 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 IGFL3Q6UXB1 125 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 ASCL4Q6XD76 172 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 C17orf107Q6ZR85 190 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 MUC20Q8N307 709 aaPredicted RBP16.88■□□□□ 0.29
VRK2-205ENST00000432057 ZNF75AQ96N20 296 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 OCSTAMPQ9BR26 566 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 CHIAQ9BZP6 476 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 OR51B6Q9H340 312 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 EIF3KQ9UBQ5 218 aaKnown RBP16.88■□□□□ 0.29
VRK2-205ENST00000432057 VSIG4Q9Y279 399 aa16.88■□□□□ 0.29
VRK2-205ENST00000432057 A0A1W2PR80 420 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 LYZL6O75951 148 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 SPINK2P20155 84 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 TBPP20226 339 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 SNRPD2P62316 118 aaKnown RBP16.87■□□□□ 0.29
VRK2-205ENST00000432057 ZMYND11Q15326 602 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 ACSF3Q4G176 576 aaPredicted RBP16.87■□□□□ 0.29
VRK2-205ENST00000432057 NKAPLQ5M9Q1 402 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 RFPL4BQ6ZWI9 263 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 C6orf201Q7Z4U5 140 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 SLC30A7Q8NEW0 376 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 OR11H4Q8NGC9 324 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 ZNF581Q9P0T4 197 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 SVILO95425 2214 aa16.87■□□□□ 0.29
VRK2-205ENST00000432057 AKR7A2O43488 359 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 SERPINA5P05154 406 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 PDZK1IP1Q13113 114 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 VWA1Q6PCB0 445 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 MYPOPQ86VE0 399 aaPredicted RBP16.86■□□□□ 0.29
VRK2-205ENST00000432057 CALHM1Q8IU99 346 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 C9orf62Q8N4C0 152 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 ASCC1Q8N9N2 400 aaKnown RBP16.86■□□□□ 0.29
VRK2-205ENST00000432057 SNIP1Q8TAD8 396 aaKnown RBP16.86■□□□□ 0.29
VRK2-205ENST00000432057 CCDC107Q8WV48 283 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 MAFIPQ8WZ33 124 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 RADILQ96JH8 1075 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 FGF23Q9GZV9 251 aaPredicted RBP16.86■□□□□ 0.29
VRK2-205ENST00000432057 RANBP3Q9H6Z4 567 aaPredicted RBP16.86■□□□□ 0.29
VRK2-205ENST00000432057 INTS1Q8N201 2190 aaKnown RBP16.86■□□□□ 0.29
VRK2-205ENST00000432057 OR4E1P0C645 316 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 CBX5P45973 191 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 TAF9Q16594 264 aa16.86■□□□□ 0.29
VRK2-205ENST00000432057 C2orf68Q2NKX9 166 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms