RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 KRT84Q9NSB2 600 aa12.72□□□□□ -0.37
CTDSP1-202ENST00000428361 POLDIP2Q9Y2S7 368 aa12.72□□□□□ -0.37
CTDSP1-202ENST00000428361 SF3B6Q9Y3B4 125 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-202ENST00000428361 RNF114Q9Y508 228 aa12.72□□□□□ -0.37
CTDSP1-202ENST00000428361 A0A1B0GW55 424 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DHRS7CA6NNS2 312 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 ZNF670-ZNF695F2Z2N8 137 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 LOC110117498-PIK3R3F6TDL0 507 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 IGHV4-59P01825 116 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4L2P0CJ85 424 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4L3P0CJ86 424 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4L4P0CJ87 422 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4L5P0CJ88 424 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4L6P0CJ89 424 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4L7P0CJ90 424 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 UBE2E1P51965 193 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 EGR3Q06889 387 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 CEP78Q5JTW2 689 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 NXNL2Q5VZ03 156 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4L9Q6RFH8 374 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 MOB3CQ70IA8 216 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 MEPCEQ7L2J0 689 aaKnown RBP12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 PDZD9Q8IXQ8 264 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DTX3Q8N9I9 347 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 TMEM185AQ8NFB2 350 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 OR51E1Q8TCB6 317 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 FAM234AQ9H0X4 552 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 PPP1R3EQ9H7J1 279 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 ZNRD1Q9P1U0 126 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 DUX4Q9UBX2 424 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 VPREB3Q9UKI3 123 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 PIGLQ9Y2B2 252 aa12.71□□□□□ -0.37
CTDSP1-202ENST00000428361 CCDC182A6NF36 153 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 G3V2T6 193 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 H0YAE9 185 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 SLC1A7O00341 560 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 DLGAP1O14490 977 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 NRASP01111 189 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 IGLV3-1P01715 115 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 FCGR1AP12314 374 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 AMY2BP19961 511 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 TGFBR2P37173 567 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 CAPZA1P52907 286 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 DGUOKQ16854 277 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 CLVS2Q5SYC1 327 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 BCL2L15Q5TBC7 163 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 HAGHLQ6PII5 290 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 ZNF322Q6U7Q0 402 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 ZDHHC13Q8IUH4 622 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 AQP3Q92482 292 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 SDSLQ96GA7 329 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 CITED1Q99966 193 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 GTF2A1LQ9UNN4 478 aa12.7□□□□□ -0.38
CTDSP1-202ENST00000428361 MEIOCA2RUB1 952 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 RNASEK-C17orf49H0YIS7 233 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 J3QT63 122 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 PSMD9O00233 223 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 PRKYO43930 277 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 PSG2P11465 335 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 FASP25445 335 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 DAPP51397 102 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 HCCSP53701 268 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 CXCR4P61073 352 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 RELBQ01201 579 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 MIDNQ504T8 468 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 SLC35F2Q8IXU6 374 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 FGFRL1Q8N441 504 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 POC1AQ8NBT0 407 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 CCDC54Q8NEL0 328 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 TMEM163Q8TC26 289 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 UTP4Q969X6 686 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 SLC7A6OSQ96CW6 309 aaPredicted RBP12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 DUS3LQ96G46 650 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 CLN6Q9NWW5 311 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 SNX5Q9Y5X3 404 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 R4GMQ9 66 aa12.69□□□□□ -0.38
CTDSP1-202ENST00000428361 ANKRD61A6NGH8 418 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 WIPF1O43516 503 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 RHBDL1O75783 438 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 ATP5HO75947 161 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 CLPXO76031 633 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 KRT8P05787 483 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 SELLP14151 372 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 FAHP16930 419 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 SAA4P35542 130 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 ELF3P78545 371 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 ATP6AP1Q15904 470 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 SLX4IPQ5VYV7 408 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 ELMOD2Q8IZ81 293 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 Q8N7P7 452 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 TCEANCQ8N8B7 351 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 ZSCAN4Q8NAM6 433 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
CTDSP1-202ENST00000428361 TAF15Q92804 592 aaKnown RBP eCLIP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms