RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PLEKHA6Q9Y2H5 1048 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 STARD10Q9Y365 291 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 SVILO95425 2214 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 DMXL2Q8TDJ6 3036 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 CACNA1GO43497 2377 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF816-ZNF321PA0A0X1KG74 233 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 RGS13O14921 159 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 OR4E1P0C645 316 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 CPT2P23786 658 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 MPGP29372 298 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 ARR3P36575 388 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 MICBQ29980 383 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 ASCL5Q7RTU5 278 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 C9orf62Q8N4C0 152 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 BHLHE23Q8NDY6 225 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 OR56B2PQ8NGI1 322 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 RADILQ96JH8 1075 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 PRRT1Q99946 306 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 PAPOLGQ9BWT3 736 aaKnown RBP9□□□□□ -0.97
HDAC9-210ENST00000428307 METTL9Q9H1A3 318 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 GPR160Q9UJ42 338 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 SLC7A11Q9UPY5 501 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 IGKV1-12A0A0C4DH73 117 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 OR2AT4A6NND4 320 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 KLK10O43240 276 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 IGKV1D-12P01611 117 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 IGHG3P01860 377 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 RTP5Q14D33 572 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 PDCD1Q15116 288 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 BRICD5Q6PL45 260 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 LHFPL2Q6ZUX7 228 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 CNEP1R1Q8N9A8 125 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 OR1K1Q8NGR3 316 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 SPSB4Q96A44 273 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 MRGPRFQ96AM1 343 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 GMPPAQ96IJ6 420 aaPredicted RBP9□□□□□ -0.97
HDAC9-210ENST00000428307 POM121L2Q96KW2 1035 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 TRAF4Q9BUZ4 470 aaPredicted RBP9□□□□□ -0.97
HDAC9-210ENST00000428307 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
HDAC9-210ENST00000428307 PECRQ9BY49 303 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 PLEKHJ1Q9NW61 149 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 CRIM1Q9NZV1 1036 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 PIPOXQ9P0Z9 390 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 EIF3KQ9UBQ5 218 aaKnown RBP9□□□□□ -0.97
HDAC9-210ENST00000428307 KCNN3Q9UGI6 736 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 VSIG4Q9Y279 399 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 NPTNQ9Y639 398 aa9□□□□□ -0.97
HDAC9-210ENST00000428307 FOXI3A8MTJ6 420 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 SPINK2P20155 84 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 SSTR2P30874 369 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 OR3A2P47893 321 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 FUT6P51993 359 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 ATP1B3P54709 279 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 MALLQ13021 153 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 STK11Q15831 433 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 C11orf88Q6PI97 169 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 MRPL21Q7Z2W9 205 aaKnown RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 CALHM1Q8IU99 346 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 SPICQ8N5J4 248 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 OR51F2Q8NH61 342 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 BCL2L2Q92843 193 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 APOBEC3DQ96AK3 386 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 TAAR6Q96RI8 345 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 PRRX2Q99811 253 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 HDHD3Q9BSH5 251 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 PTTG3PQ9NZH4 202 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 ATPIF1Q9UII2 106 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF175Q9Y473 711 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 G3V3Q6 166 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 SDCBPO00560 298 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 GOSR2O14653 212 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 LYZL6O75951 148 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 SERPINA5P05154 406 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 SFTPBP07988 381 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 IL32P24001 234 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 APLNRP35414 380 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 H2BFSP57053 126 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 TSPAN5P62079 268 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 PDZK1IP1Q13113 114 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 TSC22D1Q15714 1073 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 PNLIPRP3Q17RR3 467 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 PIGYQ3MUY2 71 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 TMEM53Q6P2H8 277 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 MDP1Q86V88 176 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 OR2AK2Q8NG84 335 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 CCDC107Q8WV48 283 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 CPNE2Q96FN4 548 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 Q96M66 194 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 OCSTAMPQ9BR26 566 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 FAAP24Q9BTP7 215 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 TM2D1Q9BX74 207 aa8.99□□□□□ -0.97
HDAC9-210ENST00000428307 ALX4Q9H161 411 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF701Q9NV72 531 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-210ENST00000428307 PTPRBP23467 1997 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 GEMIN2O14893 280 aaKnown RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF780AO75290 641 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 COX5BP10606 129 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 AMY2BP19961 511 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SNU13P55769 128 aaKnown RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 DCAF12L2Q5VW00 463 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms