RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 FAM90A2PQ658T7 463 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CLEC9AQ6UXN8 241 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 Q6ZSR3 168 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ERGIC1Q969X5 290 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 MSI2Q96DH6 328 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 ARSGQ96EG1 525 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 VSX1Q9NZR4 365 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 THAP10Q9P2Z0 257 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 IKZF2Q9UKS7 526 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 B3GALT5Q9Y2C3 310 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 SERPINE3A8MV23 424 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 EEF1E1-BLOC1S5C9J1V9 151 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CLDN34H7C241 214 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 DXOO77932 396 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 FBXO45P0C2W1 286 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 C8orf89P0DMQ9 161 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CTLA4P16410 223 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ZNF43P17038 809 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 GPR1P46091 355 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 SLC35A1P78382 337 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ZNF385CQ66K41 422 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 MFSD9Q8NBP5 474 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 WFIKKN2Q8TEU8 576 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 POM121Q96HA1 1249 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 PCED1AQ9H1Q7 454 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 KLHL13Q9P2N7 655 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ZNF346Q9UL40 294 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 CRYM-AS1A6NIL9 109 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 TMEM225BP0DP42 221 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 RPL4P36578 427 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 RPS15AP62244 130 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 FAM53BQ14153 422 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ZNF573Q86YE8 665 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 RAB42Q8N4Z0 105 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 FAM131CQ96AQ9 280 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 KXD1Q9BQD3 176 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CHST11Q9NPF2 352 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 CFAP46Q8IYW2 2715 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 M0R143 59 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CYTIPO60759 359 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 PTGER4P35408 488 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 PPP1CCP36873 323 aaKnown RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 GRK6P43250 576 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 GPR3P46089 330 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 DHPSP49366 369 aaPredicted RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 RAP1BP61224 184 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SGCGQ13326 291 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 EBPQ15125 230 aaKnown RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 ZNHIT3Q15649 155 aaPredicted RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 LY6G5CQ5SRR4 150 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 TMEM104Q8NE00 496 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 C1orf123Q9NWV4 160 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SLC22A13Q9Y226 551 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 C13orf42A0A1B0GVH6 325 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 M0R036 132 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CISD3P0C7P0 127 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SLC35E2P0CK97 266 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 HIST1H1DP16402 221 aaKnown RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 PTNP21246 168 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 PEBP1P30086 187 aaKnown RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 CDK3Q00526 305 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 IL13RA2Q14627 380 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 IQCJQ1A5X6 159 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 IAH1Q2TAA2 248 aaPredicted RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 FBXO42Q6P3S6 717 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 OR5T3Q8NGG3 340 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 DKKL1Q9UK85 242 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 GOLT1BQ9Y3E0 138 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 DCDC2BA2VCK2 349 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 TMEM250H0YL14 139 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 TP53I11O14683 189 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 IGLV3-1P01715 115 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CT62P0C5K7 136 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 DRD3P35462 400 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CD200P41217 278 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 KCNMB1Q16558 191 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 TMEM52BQ4KMG9 183 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 ALG10Q5BKT4 473 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SGPP2Q8IWX5 399 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CASTOR1Q8WTX7 329 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SLC22A18Q96BI1 424 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 ZNF524Q96C55 264 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 DHRS7CA6NNS2 312 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SYNGR4O95473 234 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 NKX6-1P78426 367 aaPredicted RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 RUNX2Q13950 521 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 LEG1Q6P5S2 330 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CSNK1A1LQ8N752 337 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CYB561D1Q8N8Q1 229 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 OR10A7Q8NGE5 316 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 OR4X1Q8NH49 305 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 BOD1Q96IK1 185 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 GPR84Q9NQS5 396 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 AURKAIP1Q9NWT8 199 aaPredicted RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 CGGBP1Q9UFW8 167 aaPredicted RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 IL36AQ9UHA7 158 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 MEMO1Q9Y316 297 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms