RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443		U3KQA8	63 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	ZNF814	B7Z6K7	855 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	SDCBP	O00560	298 aa	Predicted RBP	11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	CIDEA	O60543	219 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	OR2F2	O95006	317 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	ACTL6A	O96019	429 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	PGAM2	P15259	253 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	PTGDS	P41222	190 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	OR3A4P	P47883	348 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	SLC6A9	P48067	706 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	OR2F1	Q13607	317 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	OR8G1	Q15617	311 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	AVPI1	Q5T686	147 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	GLIPR1L1	Q6UWM5	242 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	OXGR1	Q96P68	337 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	PIGQ	Q9BRB3	760 aa		11.44	□□□□□ -0.58
COL12A1-205	ENST00000425443	IGHV3-15	A0A0B4J1V0	119 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443		H0YIZ8	118 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	SOCS1	O15524	211 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	PGA4	P0DJD7	388 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	PGA3	P0DJD8	388 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	RBP2	P50120	134 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	NCMAP	Q5T1S8	102 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	ZNF385C	Q66K41	422 aa	Predicted RBP	11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	FAM57B	Q71RH2	274 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	REC114	Q7Z4M0	266 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	S100A7A	Q86SG5	101 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	PUSL1	Q8N0Z8	303 aa	Known RBP	11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	MAFA	Q8NHW3	353 aa	Predicted RBP	11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	FAM122A	Q96E09	287 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	ST6GALNAC5	Q9BVH7	336 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	MRPL13	Q9BYD1	178 aa	Known RBP	11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	SLC2A8	Q9NY64	477 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	NCOA6	Q14686	2063 aa	Predicted RBP	11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443		A0A0A6YYH2	397 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443		A6NJ64	397 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	CLDN6	P56747	220 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	PMS2CL	Q68D20	193 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	OR5AP2	Q8NGF4	316 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	ASB13	Q8WXK3	278 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	GNRHR2	Q96P88	292 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	RNF126	Q9BV68	326 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	GPR84	Q9NQS5	396 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	PILRB	Q9UKJ0	227 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	LHFPL6	Q9Y693	200 aa		11.43	□□□□□ -0.58
COL12A1-205	ENST00000425443	C5orf63	A6NC05	138 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	MSGN1	A6NI15	193 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443		F5H5K5	113 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	MASP2	O00187	686 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	RAB4A	P20338	218 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	ZNF121	P58317	390 aa	Predicted RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	SLC35A1	P78382	337 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	ARFRP1	Q13795	201 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	SLC25A53	Q5H9E4	307 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	PLAC9	Q5JTB6	97 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	OPN5	Q6U736	354 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	AGBL5	Q8NDL9	886 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	CCDC54	Q8NEL0	328 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	SIRT7	Q9NRC8	400 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	ZNF319	Q9P2F9	582 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	NXT1	Q9UKK6	140 aa	Known RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	CSAG2	Q9Y5P2	127 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	C1orf196	B1AJZ1	125 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	TRAF3IP2	O43734	574 aa	Predicted RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	RAD51D	O75771	328 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	SERPINF1	P36955	418 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	RIPPLY1	Q0D2K3	151 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	IL11RA	Q14626	422 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	CCDC157	Q569K6	752 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	TMEM200A	Q86VY9	491 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	LDLRAD3	Q86YD5	345 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	OR4K15	Q8NH41	348 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	OR6X1	Q8NH79	312 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	THAP6	Q8TBB0	222 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	LIN37	Q96GY3	246 aa	Predicted RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	PRRT1	Q99946	306 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	DKKL1	Q9UK85	242 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	HDGFL3	Q9Y3E1	203 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	EXPH5	Q8NEV8	1989 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	NCOR1	O75376	2440 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443		A0A087X0M5	115 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443		A0A1B0GX30	115 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	PATE3	B3GLJ2	98 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	NPIPA2	E9PIF3	369 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	NPIPA3	F8WFD2	350 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	ADAP1	O75689	374 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	CCL4	P13236	92 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	RPS2	P15880	293 aa	Known RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	HLA-G	P17693	338 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	AKR1C3	P42330	323 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	CX3CR1	P49238	355 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	SLC25A24	Q6NUK1	477 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	MRPL14	Q6P1L8	145 aa	Known RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	ETV3L	Q6ZN32	361 aa		11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.42	□□□□□ -0.58
COL12A1-205	ENST00000425443	PAQR8	Q8TEZ7	354 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms