RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ZNF2Q9BSG1 426 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 HPF1Q9NWY4 346 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 DNAJB11Q9UBS4 358 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 IFNA2P01563 188 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 SERPINA5P05154 406 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 PET100P0DJ07 73 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 CCL3P10147 92 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 PJVKQ0ZLH3 352 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 SURF2Q15527 256 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 C10orf91Q5T1B1 145 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 HAGHLQ6PII5 290 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 CBLN2Q8IUK8 224 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 SHDQ96IW2 340 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 JSRP1Q96MG2 331 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 UQCC1Q9NVA1 299 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 NUDT19A8MXV4 375 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 OTX1P32242 354 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-208ENST00000413473 RBMXP38159 391 aaKnown RBP13.09□□□□□ -0.31
TTC39A-208ENST00000413473 CXCL12P48061 93 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 RBM39Q14498 530 aaKnown RBP13.09□□□□□ -0.31
TTC39A-208ENST00000413473 IAH1Q2TAA2 248 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-208ENST00000413473 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 NSUN5P2Q63ZY6 315 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 OR9K2Q8NGE7 335 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 ADAMTS17Q8TE56 1095 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 SGK3Q96BR1 496 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 GPR173Q9NS66 373 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 MEMO1Q9Y316 297 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 FAM96BQ9Y3D0 163 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 A0A087WZY1 265 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 H7C2Y5 167 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 K7ESF4 209 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 ZIC3O60481 467 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
TTC39A-208ENST00000413473 LRP3O75074 770 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 MTRF1O75570 445 aaKnown RBP13.09□□□□□ -0.31
TTC39A-208ENST00000413473 TMEM225BP0DP42 221 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 HIST1H3AP68431 136 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 ARL6IP1Q15041 203 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 HIST2H3PS2Q5TEC6 136 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 HIST2H3AQ71DI3 136 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 TMEM123Q8N131 208 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 FBXO17Q96EF6 278 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 CARHSP1Q9Y2V2 147 aaKnown RBP13.09□□□□□ -0.31
TTC39A-208ENST00000413473 PCDHGA1Q9Y5H4 931 aa13.09□□□□□ -0.31
TTC39A-208ENST00000413473 VAMP5O95183 116 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 H2AFB1P0C5Y9 115 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 HKR1P10072 659 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 ZNF708P17019 499 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 RCC1P18754 421 aaPredicted RBP13.08□□□□□ -0.32
TTC39A-208ENST00000413473 MTCP1P56278 107 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 FLI1Q01543 452 aaPredicted RBP13.08□□□□□ -0.32
TTC39A-208ENST00000413473 SPEM2Q0P670 501 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 CHAF1BQ13112 559 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 OR2A2Q6IF42 318 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 IL34Q6ZMJ4 242 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 FOXL2NBQ6ZUU3 175 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 SULF2Q8IWU5 870 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 OR2AE1Q8NHA4 323 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 TAF9BQ9HBM6 251 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 C1orf123Q9NWV4 160 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 SHANK1Q9Y566 2161 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 NDUFA2O43678 99 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 ANGPTL7O43827 346 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 ZNF133P52736 654 aaPredicted RBP13.08□□□□□ -0.32
TTC39A-208ENST00000413473 RPUSD3Q6P087 351 aaKnown RBP13.08□□□□□ -0.32
TTC39A-208ENST00000413473 CNTNAP3Q9BZ76 1288 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 ULBP2Q9BZM5 246 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 RHOFQ9HBH0 211 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 PROK2Q9HC23 129 aa13.08□□□□□ -0.32
TTC39A-208ENST00000413473 FRYLO94915 3013 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 CA11O75493 328 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 ACKR3P25106 362 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 RRADP55042 308 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 PRSS12P56730 875 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 TAF9Q16594 264 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 OPN5Q6U736 354 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 SGPP2Q8IWX5 399 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 SPAG16Q8N0X2 631 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 ZIC4Q8N9L1 334 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 SAP25Q8TEE9 199 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 SPTSSAQ969W0 71 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 SAT2Q96F10 170 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-208ENST00000413473 SMIM8Q96KF7 97 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 Q96M66 194 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 NAA11Q9BSU3 229 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-208ENST00000413473 FAAP24Q9BTP7 215 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 SAV1Q9H4B6 383 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-208ENST00000413473 NDRG3Q9UGV2 375 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 MSTNO14793 375 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 APOC1P02654 83 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 LIFP15018 202 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 NPBWR1P48145 328 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 ZNF84P51523 738 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 DSCR4P56555 118 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-208ENST00000413473 PPA1Q15181 289 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 HFEQ30201 348 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 RTL6Q6ICC9 239 aa13.07□□□□□ -0.32
TTC39A-208ENST00000413473 Q6ZSR3 168 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms