RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RPS27P42677 84 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR3A4PP47883 348 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 GSK3AP49840 483 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 IDH3AP50213 366 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 GZMMP51124 257 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC18A1P54219 525 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 DLX6P56179 175 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ACTA2P62736 377 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 GRB2P62993 217 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 GNG3P63215 75 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ACTG2P63267 376 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SELENOWP63302 87 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ACTC1P68032 377 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ACTA1P68133 377 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CBX1P83916 185 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM3AP98173 230 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRDX4Q13162 271 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CYLC2Q14093 348 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF273Q14593 569 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 KIR2DS1Q14954 304 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SNAPC1Q16533 368 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 PNLIPRP3Q17RR3 467 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SMIM21Q3B7S5 101 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 LRRC23Q53EV4 343 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CYBRD1Q53TN4 286 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CXorf66Q5JRM2 361 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 FGD3Q5JSP0 725 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 LDLRAD2Q5SZI1 272 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 NANOGP8Q6NSW7 305 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ERICH5Q6P6B1 374 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TEX38Q6PEX7 206 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TBPL2Q6SJ96 375 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SMARCD3Q6STE5 483 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 LCNL1Q6ZST4 164 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 C18orf65Q6ZTR6 163 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 LHFPL2Q6ZUX7 228 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 KCTD8Q6ZWB6 473 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 MBOAT2Q6ZWT7 520 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 DCXRQ7Z4W1 244 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 KRT77Q7Z794 578 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZBTB46Q86UZ6 589 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SATL1Q86VE3 508 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZDHHC21Q8IVQ6 265 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TIGD4Q8IY51 512 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CD177Q8N6Q3 437 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANKRD42Q8N9B4 389 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8J3Q8NGG0 315 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR2T4Q8NH00 348 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR4Q3Q8NH05 313 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8U1Q8NH10 309 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR4K13Q8NH42 304 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF596Q8TC21 504 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 BCAS4Q8TDM0 211 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TSPEARQ8WU66 669 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR5P3Q8WZ94 311 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 PIGCQ92535 297 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CREB3L1Q96BA8 519 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SGK3Q96BR1 496 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLAMF6Q96DU3 332 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RNFT2Q96EX2 444 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 REEP6Q96HR9 211 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RAX2Q96IS3 184 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RSRC1Q96IZ7 334 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TPD52L3Q96J77 140 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF714Q96N38 554 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RBM14Q96PK6 669 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ERMAPQ96PL5 475 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TM2D3Q9BRN9 247 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CCDC28BQ9BUN5 200 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM109Q9BVC6 243 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 GON7Q9BXV9 100 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR10A2Q9H208 303 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RGCCQ9H4X1 137 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANKRD19PQ9H560 264 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 PPP1R3EQ9H7J1 279 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 DCLRE1BQ9H816 532 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 EDA2RQ9HAV5 297 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 KRCC1Q9NPI7 259 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RPRD1BQ9NQG5 326 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 PAPOLBQ9NRJ5 636 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CENPMQ9NSP4 180 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TBC1D23Q9NUY8 699 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 MRPL22Q9NWU5 206 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CHCHD3Q9NX63 227 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RASL12Q9NYN1 266 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 DPM3Q9P2X0 92 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RHCGQ9UBD6 479 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF222Q9UK12 451 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SIGLEC7Q9Y286 467 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 A0A1W2PRQ8 180 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 hADV38S2A0JD32 116 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 DHRS12A0PJE2 317 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM120BA0PK00 339 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR6C68A6NDL8 312 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 TVP23AA6NH52 213 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 UNC119BA6NIH7 251 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR5B21A6NL26 309 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 LEUTXA8MZ59 168 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF732B4DXR9 585 aa1.86□□□□□ -2.11
RNU4-53P-201ENST00000410828 J3KTA2 159 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms