RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ARPINQ7Z6K5 226 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 MRPL41Q8IXM3 137 aaKnown RBP13.35□□□□□ -0.27
CHMP3-203ENST00000409225 ZDHHC23Q8IYP9 409 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 CD177Q8N6Q3 437 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 OR13D1Q8NGV5 346 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 C7orf34Q96L11 122 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 HIST1H2AAQ96QV6 131 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 C1orf21Q9H246 121 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 EGLN3Q9H6Z9 239 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 HILPDAQ9Y5L2 63 aa13.35□□□□□ -0.27
CHMP3-203ENST00000409225 RFPL4AA6NLU0 287 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 RFPL4AL1F8VTS6 287 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 NME4O00746 187 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 CST4P01036 141 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 APOC1P02654 83 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 PIPP12273 146 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-203ENST00000409225 CEBPDP49716 269 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-203ENST00000409225 DYNLT3P51808 116 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 OR12D2P58182 307 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 SLC34A1Q06495 639 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHMP3-203ENST00000409225 DYNC1I2Q13409 638 aaKnown RBP13.34□□□□□ -0.27
CHMP3-203ENST00000409225 FAM86B1Q8N7N1 296 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 SLC37A3Q8NCC5 494 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 SAR1AQ9NR31 198 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 CD300AQ9UGN4 299 aa13.34□□□□□ -0.27
CHMP3-203ENST00000409225 DNAH1Q9P2D7 4330 aa13.33□□□□□ -0.27
CHMP3-203ENST00000409225 MEX3AA1L020 520 aaKnown RBP13.33□□□□□ -0.28
CHMP3-203ENST00000409225 ZNF732B4DXR9 585 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 SLC1A7O00341 560 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 MTRF1O75570 445 aaKnown RBP13.33□□□□□ -0.28
CHMP3-203ENST00000409225 GADD45GO95257 159 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 GSSP48637 474 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 DMRTC1Q5HYR2 192 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 TEX30Q5JUR7 227 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 NKAPLQ5M9Q1 402 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 ZNF626Q68DY1 528 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 ETV3LQ6ZN32 361 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 OR52L1Q8NGH7 329 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 OR6K6Q8NGW6 343 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 ZNF671Q8TAW3 534 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 TFAP2CQ92754 450 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 LYZL4Q96KX0 146 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 ATP6V1G3Q96LB4 118 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 ASCL2Q99929 193 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 OR51I2Q9H344 312 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 RGCCQ9H4X1 137 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 MRGBPQ9NV56 204 aa13.33□□□□□ -0.28
CHMP3-203ENST00000409225 GAR1Q9NY12 217 aaKnown RBP13.33□□□□□ -0.28
CHMP3-203ENST00000409225 HUWE1Q7Z6Z7 4374 aaKnown RBP13.32□□□□□ -0.28
CHMP3-203ENST00000409225 C17orf98A8MV24 154 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 LPLP06858 475 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 CLUP10909 449 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 AZGP1P25311 298 aaKnown RBP13.32□□□□□ -0.28
CHMP3-203ENST00000409225 PRDX2P32119 198 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 DLX6P56179 175 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 SMIM11AP58511 58 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 DGCR2P98153 550 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 CEP78Q5JTW2 689 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 CASC10Q5T4H9 136 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 UNQ9370/PRO34162Q6UXP9 181 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 ACP7Q6ZNF0 438 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 ZNF561Q8N587 486 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 RNF133Q8WVZ7 376 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 ZNF488Q96MN9 340 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 ABHD6Q9BV23 337 aa13.32□□□□□ -0.28
CHMP3-203ENST00000409225 H0YHG0 523 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 H3BUI4 141 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 SPI1P17947 270 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 IFNGR2P38484 337 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 GNG3P63215 75 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 TSPAN31Q12999 210 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 CRMP1Q14194 572 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 SMIM21Q3B7S5 101 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-203ENST00000409225 HAGHLQ6PII5 290 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-203ENST00000409225 CALHM1Q8IU99 346 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 OR11H6Q8NGC7 330 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 OR51D1Q8NGF3 324 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 OR6N2Q8NGY6 317 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 NDNFQ8TB73 568 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 GNPDA2Q8TDQ7 276 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 AQP3Q92482 292 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 AMELYQ99218 206 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 KCTD14Q9BQ13 255 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-203ENST00000409225 MCRIP2Q9BUT9 160 aaKnown RBP13.31□□□□□ -0.28
CHMP3-203ENST00000409225 RASL12Q9NYN1 266 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-203ENST00000409225 CDH10Q9Y6N8 788 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 V9GYQ6 96 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 STAB2Q8WWQ8 2551 aa13.31□□□□□ -0.28
CHMP3-203ENST00000409225 LYSTQ99698 3801 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-203ENST00000409225 FAM90A22PA8MWA6 464 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 SLC22A2O15244 555 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 H2BFMP0C1H6 154 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 OPRL1P41146 370 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 DOC2BQ14184 412 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 ABCA11PQ4W5N1 156 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms