RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TDGF1P13385 188 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 RCC1P18754 421 aaPredicted RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 SLC35A1P78382 337 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 RPUSD3Q6P087 351 aaKnown RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 GGNQ86UU5 652 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 SULF2Q8IWU5 870 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 PAQR8Q8TEZ7 354 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 ST6GALNAC5Q9BVH7 336 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 NOSIPQ9Y314 301 aaKnown RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 KLF2Q9Y5W3 355 aaPredicted RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 IGKV1-12A0A0C4DH73 117 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 C5orf51A6NDU8 294 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 C9JQL5 133 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 G3V3Y1 287 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 WDPCPO95876 746 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 IGKV1D-12P01611 117 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 HKR1P10072 659 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 EIF1P41567 113 aaKnown RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 CLDN15P56746 228 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 RBM39Q14498 530 aaKnown RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 TMEM268Q5VZI3 342 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 OR2A2Q6IF42 318 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 COMMD2Q86X83 199 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 C20orf196Q8IYI0 205 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 OR51T1Q8NGJ9 327 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 FGFBP3Q8TAT2 258 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 TMED6Q8WW62 240 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 PIGTQ969N2 578 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 SMIM8Q96KF7 97 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 PIGQQ9BRB3 760 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 SCRT1Q9BWW7 348 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 TLNRD1Q9H1K6 362 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 PURGQ9UJV8 347 aaKnown RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 POLR1DQ9Y2S0 133 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 CARHSP1Q9Y2V2 147 aaKnown RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 SERPINA2P20848 420 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 ZNF169Q14929 603 aaPredicted RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 PDSS1Q5T2R2 415 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 CDCP2Q5VXM1 449 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 PPP1R3BQ86XI6 285 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 BAP18Q8IXM2 172 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 CLRN3Q8NCR9 226 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 EMG1Q92979 244 aaKnown RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 BSCL2Q96G97 398 aaPredicted RBP8.58□□□□□ -1.04
MSH2-202ENST00000406134 SLC6A15Q9H2J7 730 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 PILRBQ9UKJ0 227 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 ZDHHC8Q9ULC8 765 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 TRIOBPQ9H2D6 2365 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 F5H5K5 113 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 CA11O75493 328 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 IFNA6P05013 189 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 STARP49675 285 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 Q0VFX4 171 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 ASCL4Q6XD76 172 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 OR5H2Q8NGV7 314 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 OR10Z1Q8NGY1 313 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 OR2AE1Q8NHA4 323 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 PIGLQ9Y2B2 252 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 AMDHD2Q9Y303 409 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 LINC01387J3KSC0 135 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 TNFSF11O14788 317 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 CYC1P08574 325 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 BLVRBP30043 206 aaPredicted RBP8.57□□□□□ -1.04
MSH2-202ENST00000406134 LPAR6P43657 344 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 INO80EQ8NBZ0 244 aaPredicted RBP8.57□□□□□ -1.04
MSH2-202ENST00000406134 DYRK2Q92630 601 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 DEFB126Q9BYW3 111 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 EHFQ9NZC4 300 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 TUBD1Q9UJT1 453 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
MSH2-202ENST00000406134 CRYM-AS1A6NIL9 109 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 ZNF716A6NP11 495 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 NTN3O00634 580 aaPredicted RBP8.56□□□□□ -1.04
MSH2-202ENST00000406134 ZNF205O95201 554 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 FCGR2AP12318 317 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 AMY2BP19961 511 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 LMO1P25800 156 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 HLA-BQ31612 363 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 TMEM42Q69YG0 159 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 TMEM17Q86X19 198 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 PGAM5Q96HS1 289 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 ZNF160Q9HCG1 818 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 A0A087WZY1 265 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 PLATP00750 562 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 CCL4P13236 92 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 ID4P47928 161 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 CSNK1A1P48729 337 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 NKAPLQ5M9Q1 402 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 CBLN2Q8IUK8 224 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 LINC00518Q8N0U6 118 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 GJC3Q8NFK1 279 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 LYPD6BQ8NI32 183 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 ADGRG7Q96K78 797 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 C2orf50Q96LR7 162 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 TMEM231Q9H6L2 316 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 DCAF16Q9NXF7 216 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 GHRLQ9UBU3 117 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 LPAR3Q9UBY5 353 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms